Group: myGrid

People working or contributing to the myGrid project, including the Taverna developers

Created at: Friday 30 November 2007 @ 12:19:26 (GMT)

Unique name: myGrid


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Pack Everything You Need To Know About myExperiment...

Created: 02/07/08 @ 22:31:12 | Last updated: 02/07/08 @ 23:11:22

... but were afraid to ask. This is the pack to go to for all information about myExperiment and the people involved in this project!

9 items in this pack

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Pack Taverna 1.7.1 starter pack

Created: 17/07/08 @ 21:06:12 | Last updated: 20/07/08 @ 15:46:51

Everything to get started with Taverna 1.7.1

16 items in this pack

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Blob Example Genbank data

Created: 25/09/08 @ 15:00:28

Credits: User Alan Williams

License: Creative Commons Attribution-Share Alike 3.0 License

Example file containing GenBank data so that it can be used for example Taverna workflows

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Blob Example SwissProt Data

Created: 25/09/08 @ 15:09:03 | Last updated: 25/09/08 @ 15:09:04

Credits: User Alan Williams

License: Creative Commons Attribution-Share Alike 3.0 License

Example SwissProt data to be used for Taverna examples.

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Blob Example XML file

Created: 26/09/08 @ 12:12:41 | Last updated: 26/09/08 @ 12:12:42

Credits: User Alan Williams

License: Creative Commons Attribution-Share Alike 3.0 License

XML file to be used for example workflows

File type: text/xml

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Blob Example XSLT file

Created: 26/09/08 @ 12:13:31 | Last updated: 26/09/08 @ 12:13:32

Credits: User Alan Williams

License: Creative Commons Attribution-Share Alike 3.0 License

XSLT file to be used for example workflows

File type: application/octet-stream

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Pack Taverna localworker example pack

Created: 27/09/08 @ 17:57:39 | Last updated: 27/09/08 @ 18:23:50

A pack of examples of the calling of Taverna's localworkers. The example workflows make extensive use of the default value mechanism for associating a value with a port of a service.  An alternative set of workflows that use string constants to make the values more explicit is under development.

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Pack Example workflows for annotated web services

Created: 29/09/08 @ 11:57:45 | Last updated: 29/09/08 @ 11:59:09

The pack contains a number of test workflows i built when i'm annotating web services. The workflows (one or two services) have all example parameters. Cool, now you can test some web services before add them to your workflows. Do you have any workflows you built to test a service? please add them to the pack. List of myGrid annotated web services:  http://www.mygrid.org.uk/feta/mygrid/descriptions/  

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Pack Example workflow for KEGG web service

Created: 29/09/08 @ 13:28:02 | Last updated: 29/09/08 @ 13:28:03

 The pack contains a number of test workflows for kegg web service (and operations)

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Blob From biologist to web service to Taverna to myExperiment to biologist

Created: 21/03/08 @ 19:00:24 | Last updated: 23/03/08 @ 10:39:27

Credits: User Marco Roos User Martijn Schuemie Network-member AID Network-member myGrid

Attributions: Workflow BioAID_DiseaseDiscovery_byHumanUniprot

License: Creative Commons Attribution-Share Alike 3.0 License

A movie to show the principle of the round trip from a biology question via pieces of code wrapped as web services and combined into a workflow (computational experiment) in Taverna, via uploading to myExperiment and back to the biologist through myExperiment's run facility. NB: at the time of uploading this movie the runner-option was in test-phase. It is important to note that the workflow combines the work of various scientists with different expertise and some at remote locations around ...

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