Workflows

A Talend mashup to discover PARP proteins ... (3)

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A Talend workflow to answer this specific question :What is known about PARP family proteins involved in pathway according to Reactome ?by fetching RDF data from Bio2RDF`s HGNC, UniProt REST service and EBI Reactome SPARQL endpoint, all Semantic Web public resources.

Created: 2014-02-10 | Last updated: 2014-04-07

Credits: Francois Belleau

RTCalc Retention Time Prediction and Outli... (1)

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This workflow takes as input a pepXML file from PeptideProphet, applied RTCalc and outputs a filtered list of peptides based on the retention time Z-scores.

Created: 2014-02-06 | Last updated: 2014-02-06

Credits: Magnus Palmblad Sonja Holl

PhotoHawk - SSIM (1)

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This workflow provides a comparison result for 2 raw images based on PhotoHawk tool (http://datascience.github.io/photohawk/). The result is measured using SSIM metric (http://purl.org/DP/quality/measures#15).

Created: 2014-02-05

Credits: Artur Kulmukhametov

PhotoHawk - AE (1)

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This workflow provides a comparison result for 2 raw images based on PhotoHawk tool (http://datascience.github.io/photohawk/). The result is measured using AE metric (http://purl.org/DP/quality/measures#4).

Created: 2014-02-05

Credits: Artur Kulmukhametov

PhotoHawk - MAE (1)

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This workflow provides a comparison result for 2 raw images based on PhotoHawk tool (http://datascience.github.io/photohawk/). The result is measured using MAE metric (http://purl.org/DP/quality/measures#5).

Created: 2014-02-05

Credits: Artur Kulmukhametov

PhotoHawk - MSE (1)

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This workflow provides a comparison result for 2 raw images based on PhotoHawk tool (http://datascience.github.io/photohawk/). The result is measured using MSE metric (http://purl.org/DP/quality/measures#6).

Created: 2014-02-05

Credits: Artur Kulmukhametov

PhotoHawk - PAE (1)

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This workflow provides a comparison result for 2 raw images based on PhotoHawk tool (http://datascience.github.io/photohawk/). The result is measured using PAE metric (http://purl.org/DP/quality/measures#7).

Created: 2014-02-05

Credits: Artur Kulmukhametov

Test interaction page in myExperiment (9)

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This workflow demonstrates the feasibility of storing interaction pages in myExperiment

Created: 2014-02-04 | Last updated: 2014-02-06

Credits: Jon Giddy

Entrez Gene to KEGG Pathway (1)

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This workflow takes in Entrez gene ids then adds the string "ncbi-geneid:" to the start of each gene id. These gene ids are then cross-referenced to KEGG gene ids. Each KEGG gene id is then sent to the KEGG pathway database and its relevant pathways returned.

Created: 2014-01-30

Credits: Alice Heliou

setp2 (1)

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Traduction test

Created: 2014-01-30 | Last updated: 2014-01-30

Credits: Alice Heliou