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Showing 4527 results. Use the filters on the left and the search box below to refine the results.
Taverna 2
Uploader
254?size=60x60 Cn Peter Li

Workflow Get extended compound information for a li... (1)

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 Returns information for a given list of chemspider compound identifiers.

Created: 2010-07-12 | Last updated: 2010-07-12

Credits: User Peter Li

Taverna 2
Uploader
254?size=60x60 Cn Peter Li

Workflow Get extended compound information (1)

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Returns information from chemspider for a given chemical represented by its chemspider identifier

Created: 2010-07-12 | Last updated: 2010-07-12

Credits: User Peter Li

Taverna 2
Uploader
254?size=60x60 Cn Peter Li

Workflow Get list of chemspider databases (1)

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Returns a list of databases catalogedReturns a list of databases cataloged by ChemSpider

Created: 2010-07-12 | Last updated: 2010-07-12

Credits: User Peter Li

Uploader
3791?size=60x60 Gb David De Roure
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Blob voID description for myExperiment

Created: 2010-07-10 08:42:35 | Last updated: 2010-07-10 09:02:05

Credits: User David De Roure

License: Creative Commons Attribution-Share Alike 3.0 Unported License

 http://vocab.deri.ie/void/guide

File type: RDF data

Comments: 0 | Viewed: 41 times | Downloaded: 21 times

This File has no tags!

SPARQL
Uploader
3791?size=60x60 Gb David De Roure

Workflow Tag Metadata (2)

  SPARQL query to show tag creator and creation time

Created: 2010-07-09 | Last updated: 2010-07-09

Credits: User David De Roure

SPARQL
Uploader
3791?size=60x60 Gb David De Roure

Workflow Similar Workflows (1)

SPARQL query to to test for workflows that should be attributed or may just be copies of earlier workflows. Use with rdf.myexperiment.org

Created: 2010-07-09

Credits: User David De Roure User David R Newman User Danius Michaelides

Taverna 2
Uploader
254?size=60x60 Cn Peter Li

Workflow Convert chemical identifier (1)

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Converts a chemical compound identifier from one format to another using the open babel web service provided by ChemSpider

Created: 2010-07-09 | Last updated: 2010-07-09

Credits: User Peter Li

Taverna 2
Uploader
254?size=60x60 Cn Peter Li

Workflow SmilesToInchi (1)

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Convert SMILES to InChI. Result is v1.02s InChI.

Created: 2010-07-09 | Last updated: 2010-07-09

Credits: User Peter Li

Taverna 2
Uploader
254?size=60x60 Cn Peter Li

Workflow MolToInchiKey (1)

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Converts a MOL file to an InChIKey. Result is v1.02s InChIKey.

Created: 2010-07-09 | Last updated: 2010-07-09

Credits: User Peter Li

Taverna 2
Uploader
254?size=60x60 Cn Peter Li

Workflow MolToInchiString (1)

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Converts a MOL file to InChI. Result is v1.02s InChI.

Created: 2010-07-09 | Last updated: 2010-07-09

Credits: User Peter Li

Taverna 2
Uploader
254?size=60x60 Cn Peter Li

Workflow isValidInChiKey (1)

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Checks that specified argument is valid InChIKey. Works for v1.02b InChIKey only.

Created: 2010-07-09 | Last updated: 2010-07-09

Credits: User Peter Li

Taverna 2
Uploader
254?size=60x60 Cn Peter Li

Workflow InchiStringToSmiles (1)

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Converts an inchi string into SMILES format

Created: 2010-07-09 | Last updated: 2010-07-09

Credits: User Peter Li

Taverna 2
Uploader
254?size=60x60 Cn Peter Li

Workflow InChIStringToMolFile (1)

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Converts an InChI string into a MOL file using the Inchi ChemSpider web service

Created: 2010-07-09 | Last updated: 2010-07-09

Credits: User Peter Li

Taverna 2
Uploader
254?size=60x60 Cn Peter Li

Workflow InChIStringToInChiKey (1)

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Converts an InChI string to an InChi key

Created: 2010-07-09 | Last updated: 2010-07-09

Credits: User Peter Li

Taverna 2
Uploader
254?size=60x60 Cn Peter Li

Workflow InChIToCSID (1)

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Convert InChI to ChemSpider ID

Created: 2010-07-09 | Last updated: 2010-07-09

Credits: User Peter Li

Taverna 2
Uploader
254?size=60x60 Cn Peter Li

Workflow InChi key to MOL file (1)

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Returns a MOL file for a given InChi key

Created: 2010-07-09 | Last updated: 2010-07-09

Credits: User Peter Li

Taverna 2
Uploader
254?size=60x60 Cn Peter Li

Workflow InChi key to Inchi string (1)

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Converts an InChI key to an InChI string using the ChemSpider Inchi web service.

Created: 2010-07-09 | Last updated: 2010-07-09

Credits: User Peter Li

Taverna 2
Uploader
254?size=60x60 Cn Peter Li

Workflow InChi key to ChemSpider identifier (1)

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Returns Converts an InChIKey to a ChemSpider ID

Created: 2010-07-09 | Last updated: 2010-07-09

Credits: User Peter Li

Taverna 2
Uploader
254?size=60x60 Cn Peter Li

Workflow Generate InChi key (1)

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Generates an inchi key for a given compound using the inchi web service provided by ChemSpider

Created: 2010-07-09 | Last updated: 2010-07-09

Credits: User Peter Li

Taverna 2
Uploader
254?size=60x60 Cn Peter Li

Workflow Generate inChi information (1)

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Uses the GenerateInchiInfo web service operation from ChemSpider to generate information relating to the InChi string for a given chemical compound

Created: 2010-07-09 | Last updated: 2010-07-09

Credits: User Peter Li

Taverna 2
Uploader
254?size=60x60 Cn Peter Li

Workflow Generate inChi (1)

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Generates an inChi string for a given chemical represented by its SMILES string, SDF or MOL file using the inchi web service provided by ChemSpider

Created: 2010-07-09 | Last updated: 2010-07-09

Credits: User Peter Li

Uploader
Avatar Yoshinobu Kano
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Blob A U-Compare workflow to extract biological events fr...

Created: 2010-07-08 21:50:25 | Last updated: 2010-09-02 04:46:05

Credits: User Yoshinobu Kano

License: GNU Lesser General Public License (LGPL) 2.1

This is a U-Compare workflow to extract biological events from texts, provided to be used with our example Taverna workflow. See our publication Kano, et al., 2010,  "Text Mining Meets Workflow: Linking U-Compare with Taverna " http://bioinformatics.oxfordjournals.org/cgi/content/abstract/btq464 for details. This file is formatted as a UIMA CPE workflow XML descriptor file.

File type: XML

Comments: 0 | Viewed: 123 times | Downloaded: 54 times

This File has no tags!

Taverna 2
Uploader
Avatar Benb

Workflow EBI_InterProScan for Taverna 2 (1)

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Perform an InterProScan analysis of a protein sequence using the EBI’s WSInterProScan service (see http://www.ebi.ac.uk/Tools/webservices/services/interproscan). The input sequence to use and the user e-mail address are inputs, the other parameters for the analysis (see Job_params) are allowed to default. InterProScan searches a protein sequence against the protein family and domain signature databases integrated into InterPro (see http://www.ebi.ac.uk/interpro/). A set of matches to the s...

Created: 2010-07-08 | Last updated: 2010-07-08

Credits: User Benb

Taverna 2
Uploader
Avatar Benb

Workflow EBI_InterProScan for Taverna 2 (1)

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Perform an InterProScan analysis of a protein sequence using the EBI’s WSInterProScan service (see http://www.ebi.ac.uk/Tools/webservices/services/interproscan). The input sequence to use and the user e-mail address are inputs, the other parameters for the analysis (see Job_params) are allowed to default. InterProScan searches a protein sequence against the protein family and domain signature databases integrated into InterPro (see http://www.ebi.ac.uk/interpro/). A set of matches to the s...

Created: 2010-07-08 | Last updated: 2010-07-08

Credits: User Benb

Taverna 2
Uploader
4174?size=60x60 Ca Francois Belleau

Workflow Who is Dr Labrie according to Pubmed publi... (2)

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To use this wokflow you need to import services from To use this wokflow you need to import services from http://proxy.bio2rdf.org/bio2rdf/services.txt you can explore the loaded data at http://proxy.bio2rdf.org/fct

Created: 2010-07-08 | Last updated: 2010-07-08

Credits: User Francois Belleau

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