1. Home

All content

Search filter terms
Filter by category
File
1243
Pack
368
Filter by type
XML
109
Filter by tag
Filter by user
Filter by licence
by-sa
3227
by
355
Filter by group
Filter by wsdl
Filter by curation
Results per page:
Sort by:
Showing 4527 results. Use the filters on the left and the search box below to refine the results.
Creator
469?size=60x60 Gb Paolo
Show View Download Download

Pack EDBT Provenance paper presentation - March, 2010


Created: 2010-03-26 14:05:34 | Last updated: 2010-03-26 14:05:52

- Keynote and PDF versions  

1 item in this pack

Comments: 0 | Viewed: 41 times | Downloaded: 17 times

Tags:
Taverna 2
Uploader
Avatar Gregg Iceton

Workflow Compare two genomes for similarity (4)

Thumb
This workflow takes the file path to two genome nucleotide files in fasta format and requests a minimum similarity required from the user.  The genomes are aligned according to the M-GCAT algorithm (http://alggen.lsi.upc.es/recerca/align/mgcat/intro-mgcat.html) and the genome similarity parsed out of the resultant log file.  Output is either 0 (genome similarity less than required similarity) or 1 (genome similarity equal to or greater than the required similarity). NB - The file p...

Created: 2010-03-17 | Last updated: 2010-03-17

Credits: User Gregg Iceton

Bioclipse Scripting Language
Uploader
4506?size=60x60 Nl Egon Willighagen

Workflow Calculate molecular mass for entries in a ... (1)

 Simple script to demonstrate how to iterate over entries in a MDL SD file and calculate some molecular property.

Created: 2010-03-08

Credits: User

Taverna 2
Uploader
1650?size=60x60 Sa Fahad Alqahtani

Workflow Transciption (DNA into RNA) (1)

Thumb
This workflow allows a user to transcibe DNA into RNA.

Created: 2010-03-05 | Last updated: 2010-03-05

Taverna 2
Uploader
Avatar Yuhuichen

Workflow CaliBayes_Client (1)

Thumb
A workflow for consuming CaliBayes web services. CaliBayes: www.calibayes.ncl.ac.uk

Created: 2010-02-03 | Last updated: 2010-02-03

Taverna 2
Uploader
Avatar Yuhuichen

Workflow SBML shorthand to SBML converter (1)

Thumb
converts SBML shorthand to SBML document via BASIS web services BASIS: www.basis.ncl.ac.uk:81/Basis SBML shorthand: http://www.staff.ncl.ac.uk/d.j.wilkinson/software/sbml-sh/

Created: 2010-02-03 | Last updated: 2010-02-03

Taverna 2
Uploader
Avatar Yuhuichen

Workflow SBML to SBML shortand converter (1)

Thumb
converts SBML document to SBML shorthand via BASIS web services BASIS: www.basis.ncl.ac.uk:81/Basis SBML shorthand: http://www.staff.ncl.ac.uk/d.j.wilkinson/software/sbml-sh/

Created: 2010-02-03 | Last updated: 2010-02-03

Uploader
1220?size=60x60 Us Izja
Show View Download Download

Blob biobanking conference

Created: 2010-01-05 14:23:37

Credits: User Izja

License: Creative Commons Attribution-Share Alike 3.0 Unported License

You are probably aware, just wanted to make sure

File type: Chemistry Plan

Comments: 0 | Viewed: 16 times | Downloaded: 15 times

This File has no tags!

Bioclipse Scripting Language
Uploader
4506?size=60x60 Nl Egon Willighagen

Workflow Convert a SMILES string into a connection ... (1)

 Bioclipse script that converts a SMILES string into a LaTeX table of the connection table of the molecule.

Created: 2009-12-16

Credits: User

Taverna 2
Uploader
1217?size=60x60 Gb Alan Williams

Workflow EBI_InterProScan_T2 (1)

Thumb
Perform an InterProScan analysis of a protein sequence using the EBI’s WSInterProScan service (see http://www.ebi.ac.uk/Tools/webservices/services/interproscan). The input sequence to use and the user e-mail address are inputs, the other parameters for the analysis (see Job_params) are allowed to default. InterProScan searches a protein sequence against the protein family and domain signature databases integrated into InterPro (see http://www.ebi.ac.uk/interpro/). A set of matches to the s...

Created: 2009-12-15

Credits: User Alan Williams

Uploader
Avatar Gb Catherine Canevet
Show View Download Download

Blob PlnTFDB (26/09/09)

Created: 2009-12-15 18:26:11

Credits: User Catherine Canevet

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Ondex graph for the Plant transcription factor database created on 26/09/09

File type: application/x-gzip-compressed

Comments: 0 | Viewed: 23 times | Downloaded: 14 times

This File has no tags!

Uploader
Avatar Gb Catherine Canevet
Show View Download Download

Blob KEGG Yeast (15/01/09)

Created: 2009-12-15 18:22:42

Credits: User Catherine Canevet

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Ondex graph for KEGG Yeast created on 15/01/09

File type: application/x-gzip-compressed

Comments: 0 | Viewed: 18 times | Downloaded: 12 times

This File has no tags!

Uploader
Avatar Gb Catherine Canevet
Show View Download Download

Blob KEGG Arabidopsis, Rice, Sorghum, Wheat (15/09/09)

Created: 2009-12-15 18:21:43

Credits: User Catherine Canevet

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Ondex graph for KEGG Arabidopsis, Rice, Sorghum, Wheat created on 15/09/09

File type: application/x-gzip-compressed

Comments: 0 | Viewed: 38 times | Downloaded: 36 times

This File has no tags!

Uploader
Avatar Gb Catherine Canevet
Show View Download Download

Blob KEGG Arabidopsis (11/09/09)

Created: 2009-12-15 18:20:37

Credits: User Catherine Canevet

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Ondex graph for KEGG Arabidopsis created on 11/09/09

File type: application/x-gzip-compressed

Comments: 0 | Viewed: 19 times | Downloaded: 17 times

This File has no tags!

Uploader
Avatar Gb Catherine Canevet
Show View Download Download

Blob AtRegNet (26/09/09)

Created: 2009-12-15 18:18:49

Credits: User Catherine Canevet

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Ondex graph for AtRegNet created on 26/09/09.

File type: application/x-gzip-compressed

Comments: 0 | Viewed: 19 times | Downloaded: 17 times

This File has no tags!

Uploader
Avatar Gb Catherine Canevet
Show View Download Download

Blob AraCyc (13/09/09)

Created: 2009-12-15 18:07:03 | Last updated: 2009-12-15 18:19:38

Credits: User Catherine Canevet

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Ondex graph for AraCyc created on 13/09/09.

File type: application/x-gzip-compressed

Comments: 0 | Viewed: 20 times | Downloaded: 20 times

This File has no tags!

Taverna 2
Uploader
4174?size=60x60 Ca Francois Belleau

Workflow demo_dbpedia_search2graph (1)

Thumb
Do a full text search in DBpedia and load triples from results into a local Virtuoso graph.Do a full text search in DBpedia and load result resource triples into a local Virtuoso graph.

Created: 2009-11-27

Credits: User Francois Belleau

Taverna 2
Uploader
25?size=60x60 England David Withers

Workflow Beanshell Test (1)

Thumb
A test workflow that uses beanshell services

Created: 2009-11-10

Creator
3791?size=60x60 Gb David De Roure
Show View Download Download

Pack Presentation - myExperiment Supporting social curati...


Created: 2009-10-15 14:56:51 | Last updated: 2009-10-15 15:08:51

Title: myExperiment Supporting social curation for workflows and protocols Speaker: Carole Goble Event: Bio IT World Event URL: http://www.the-infoshop.com/conference/bio-itworld-euro09/conftracks_3.shtml Location: Hannover, Germany Date: Wednesday, October 7, 2009 Formats: .ppt

1 item in this pack

Comments: 0 | Viewed: 37 times | Downloaded: 10 times

This Pack has no tags!

Creator
874?size=60x60 Nl Paulcwv...
Show View Download Download

Pack TestCoin


Created: 2009-10-12 22:09:35

TestCoin

0 items in this pack

Comments: 0 | Viewed: 35 times | Downloaded: 15 times

Tags:
Creator
772?size=60x60 Tg Jcasson
Show View Download Download

Pack John Casson's Pack


Created: 2009-09-11 11:56:26 | Last updated: 2009-09-11 11:59:54

A pack consisting solely of liquid Awesomeness.

4 items in this pack

Comments: 0 | Viewed: 31 times | Downloaded: 8 times

This Pack has no tags!

Uploader
772?size=60x60 Tg Jcasson
Show View Download Download

Blob John Casson Likes This

Created: 2009-09-11 11:47:15

Credits: User Jcasson

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Just in case I like something

File type: TIFF image

Comments: 0 | Viewed: 18 times | Downloaded: 13 times

This File has no tags!

Creator
3791?size=60x60 Gb David De Roure
Show View Download Download

Pack Presentation - A Web Science Perspective on the Futu...


Created: 2009-09-06 10:40:25 | Last updated: 2009-09-06 10:40:59

Title: A Web Science Perspective on the Future Internet Speaker: David De Roure Event: Future Internet Symposium Event URL: http://www.fis2009.org/ Location: Berlin, Germany Date: Wednesday, September 2, 2009 Formats: .ppt  

2 items in this pack

Comments: 0 | Viewed: 36 times | Downloaded: 11 times

This Pack has no tags!

Creator
3791?size=60x60 Gb David De Roure
Show View Download Download

Pack Presentation - Web Science in 20mins


Created: 2009-09-01 12:00:43 | Last updated: 2009-09-01 12:02:48

Title: Web Science in 20mins Speaker: David De Roure Event: Colocated workshop at Future Internet Symposium Event URI: http://esw.w3.org/topic/HCLSIG/Meetings/2009-04-30_F2F Location: Berlin, Germany Date: Tuesday, September 1, 2009 Formats: .ppt

1 item in this pack

Comments: 0 | Viewed: 31 times | Downloaded: 10 times

This Pack has no tags!

Uploader
734?size=60x60 Fr Denis costello
Show View Download Download

Blob EU Call for proposals for Machine translations for t...

Created: 2009-08-12 16:23:18 | Last updated: 2009-08-12 16:27:11

Credits: User Denis costello

License: Creative Commons Attribution-Share Alike 3.0 Unported License

See page 28 of enclosed document outlining call for projects to be funding by EU in the context of Information Society.  More info: http://ec.europa.eu/information_society/activities/ict_psp/participating/calls/call_proposals_09_bis/index_en.htm   "The total funding available for this theme is 14 M€ and it is intended to fund actions under the three objectives listed below."

File type: Adobe PDF

Comments: 0 | Viewed: 51 times | Downloaded: 24 times

This File has no tags!

Results per page:
Sort by:
Funded by: BioVeL, EPSRC, JISC, Microsoft

Affiliates: myGrid, Taverna, BioCatalogue
About | Privacy | Publications | Contact / Feedback | Mailing List
Icons: Silk icon set 1.3

Copyright © 2007 – 2018 The University of Manchester and University of Southampton