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Project Biovel

Blob Demographic data Gentiana pneumonanthe 1987-1988 fro...

Created: 2012-11-02 10:59:24 | Last updated: 2012-11-07 08:56:00

Credits: User Jon Giddy User Maria Paula Balcazar-Vargas User Gerard Oostermeijer

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Small example file to allow users to run population modelling workflow  

File type: Plain text

Comments: 0 | Viewed: 78 times | Downloaded: 52 times

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Workflow Creation of a stage matrix model from demo... (2)

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This workflow create a stage matrix model based on two years census data of tagged or mapped individuals of an animal or plant population. Each annual census describes for each individual its life stage, reproductive output (estimated number offprings) and whether or not it is a new recruit. The workflow converts this data into a stage matrix model from 1 year to 2 that contains transitions probabilities from each stage to the next. This workflow has been created by the Biodiversity Virtual...

Created: 2012-11-01 | Last updated: 2014-07-25

Credits: User Maria Paula Balcazar-Vargas User Jon Giddy User Gerard Oostermeijer

Attributions: Workflow Matrix Population Model construction and analysis v20 Blob Demographic data Gentiana pneumonanthe 1987-1988 from Terschelling File.

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Workflow Measuring Cellular Respiration in Animals (1)

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 This is an incomplete workflow of an experiment designed to measure the cellular respiration of different animals under different conditions.

Created: 2012-10-31

Credits: User dhefley

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Workflow Cellular Respiration of Peas (1)

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  Does temperature influence the rate of cellular respiration?

Created: 2012-10-31 | Last updated: 2012-10-31

Credits: User dhefley

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Workflow Extract average Solar wind speed from ACE ... (1)

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It reads the data coming from a MDES (HELIO) query and calculates the average Solar Wind speed. Notice that it just works for ACE as other missions could have the columns in different order.

Created: 2012-10-30

Credits: User Eoincar

Blob Semantic Annotation of Web Services (Feta)

Created: 2012-10-26 09:45:01

Credits: User Khalid Belhajjame

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This zip file contains the semantic annotations of web services using Feta.

File type: ZIP archive

Comments: 0 | Viewed: 29 times | Downloaded: 16 times

This File has no tags!

Uploader

Workflow Solar Wind properties and plot (1)

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Using HELIO-MDES this workflow provides some properties of the solar wind from an input date and a mission and the plot +/-1 day for context.

Created: 2012-10-25

Credits: User David PS

Attributions: Workflow MDES simple execution

Creator

Pack Presentation - Introduction to Big Data and its Pote...


Created: 2012-10-25 01:09:14 | Last updated: 2012-10-25 01:09:46

Presentation at Dementia Conference (Evington Initiative) held at Wellcome Trust, 22-23 October 2012. Acknowledgements to McKinsey & Company, also Tim Clark (MGH) and Iain Buchan (University of Manchester), for input to slides.

1 item in this pack

Comments: 0 | Viewed: 20 times | Downloaded: 5 times

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Workflow Back CIR-CME propagation model (1)

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With a observing time at an object and the type of PM that you want to run executes it and provides the plots and the time and longitude where it should be seen the origin of the event.

Created: 2012-10-24

Credits: User David PS User Anja Le Blanc

Attributions: Workflow CME backwards propagation Workflow Co-rotating Interaction Regions backwards propagation

Uploader

Workflow Parameter-optimization-SVM-classifier-work... (1)

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Workflow with nested loops for SVM parameter optimization and model XValidation

Created: 2012-10-24

Uploader

Workflow When do the Fastest type II CME should be ... (2)

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The fastest CME is found from an interval of time, and propagated to Earth, in two steps, first to obtain the Solar wind speed at Earth and then propagated again with a more reasonable CME speed. The output produces Min-Max ETAs for each object in the heliosphere and the plots of the final propagation model. This Workflow was produced as one of the challenges in the HELIO CDAW-IV hosted at TCD

Created: 2012-10-21 | Last updated: 2013-03-20

Credits: User David PS User Eoincar User Gab User Baptiste Cecconi User Shanem User Jbyrne User Florian Mayer User Natasha User A lynnyk

Attributions: Workflow LASCO_CME_QUERY Workflow LASCO_CME_QUERY Workflow MDES simple execution Workflow timeToTimeRange Workflow Forward CME propagation model (SHEBA) - defined outputs Workflow When did the fastest type II CME happened? Workflow Goes Flare Check WF Workflow 100CME_task1 Workflow Extract average Solar wind speed from ACE data

Uploader

Workflow Forward CME propagation model (SHEBA) - de... (1)

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Extract Objects, HitOrMiss, ETAs and plots for a selected run of the SHEBA forward CME.

Created: 2012-10-21

Credits: User David PS

Attributions: Workflow CME backwards propagation

Uploader

Workflow When did the fastest type II CME happened? (1)

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Simple query to the HELIO Event Catalogue to extract the start and end time of the fastest CME from the Wind Type II catalogue. Also it extracts the Xray Class from the flare associated to the CME

Created: 2012-10-21

Credits: User David PS User Eoincar

Attributions: Workflow Extract content of columns from VOTables

Workflow get_Disease_Id_by_Pathway (1)

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retrieve Disease Id related to a gien pathway in KEGG db

Created: 2012-10-19

Credits: User Massimo La Rosa User Antonino Fiannaca

Workflow Retrieve_Pubmed_Publication_by_kegg_pathwa... (1)

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This workflow shows in your browser pubmed articles related to input pathway

Created: 2012-10-18

Credits: User Massimo La Rosa User Antonino Fiannaca

Workflow APIS EPN-TAP Query (1)

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Use this workflow to query APIS (Auroral Planetary Imaging and Spectroscopy) using the EPN-TAP protocol.

Created: 2012-10-18

Credits: User Baptiste Cecconi

Workflow DAE Random Image Selector (1)

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DAE Webservice providing n random images from a given data set. 

Created: 2012-10-16

Credits: User Bart Lamiroy

Workflow NCC Image Binarization (1)

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Converts color or grayscale image to black-and-white. Winning contribution by the NCI/CADD group at the National Institutes of Health for the ICDAR 2011 Document Analysis Algorithm Contributions in End-to-End Applications Contest.

Created: 2012-10-16

Credits: User Bart Lamiroy

Workflow NCC Document Layout Segmentation (1)

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Segments a black-and-white input image into text, line drawing and picture images. Contribution by the NCI/CADD group at the National Institutes of Health for the ICDAR 2011 Document Analysis Algorithm Contributions in End-to-End Applications Contest.

Created: 2012-10-16

Credits: User Bart Lamiroy

Workflow Standford Named Entity Detection (1)

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 Elementary OCR workflow for execution on the on-line DAE platform. Takes a text file as input. Implements a Named entity detection algorithm by Jenny Finkel and Christopher Manning as described in Jenny Rose Finkel, Trond Grenager, and Christopher Manning. 2005. "Incorporating Non-local Information into Information Extraction Systems by Gibbs Sampling". Proceedings of the 43nd Annual Meeting of the Association for Computational Linguistics (ACL 2005), pp. 363-370. ...

Created: 2012-10-16

Credits: User Bart Lamiroy

Workflow Convert (1)

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Elementary workflow for execution on the on-line DAE platform. Converts an input image into another format by using the ImageMagick "convert" program.

Created: 2012-10-16 | Last updated: 2012-10-16

Credits: User Bart Lamiroy

Workflow Ocrad 0.19 Basic Workflow (1)

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Elementary OCR workflow for execution on the on-line DAE platform. Implement v0.19 of the ocrad OCR engine. (requires an PGM or PMB input image URL) 

Created: 2012-10-16 | Last updated: 2012-10-16

Credits: User Bart Lamiroy

Workflow Tesseract 2.04 Basic Workflow (1)

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 Elementary workflow for execution on the on-line DAE platform. (requires an uncompressed tiff image URL as input or will fail otherwise)

Created: 2012-10-16

Credits: User Bart Lamiroy

Creator

Pack SKOS vocabularies repository


Created: 2012-10-15 10:11:26

 A collection of SKOS vocabularies from the Web

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Comments: 0 | Viewed: 25 times | Downloaded: 12 times

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Creator

Pack Presentation - The Reality of Reproducibility of Com...


Created: 2012-10-12 19:48:14 | Last updated: 2012-10-12 20:14:01

Title: The Reality of Reproducibility of Computational Science Speaker: Carole Goble Event: IEEE e-Science 2012 Event URL: http://www.ci.uchicago.edu/escience2012/ Location: Chicago, US Date: Thursday, October 11, 2012 Formats: .ppt Abstract: Reproducibility in principle underpins the scientific method. For an experimental finding to be reproducible its materials must be available and its methods clear, accurate and transparent. In this talk I will explore the reality of rep...

4 items in this pack

Comments: 0 | Viewed: 34 times | Downloaded: 8 times

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