All content

View Download

Long Tail Research and the Rise of Social Machines

Created: 2012-07-30 07:26:22 | Last updated: 2012-07-30 15:14:48

5 items in this pack

Comments: 0 | Viewed: 29 times | Downloaded: 7 times

Genome variant to Protein change (1)

• Download

Reports protein change, given a genomic variant, using mutalyzer

Created: 2012-07-27 | Last updated: 2012-10-29

Credits: Helen Hulme

Extract SDSS field information and PSF (5)

• Download

This workflow gathers information needed by the execution of Sextractor, Galfit and Ellipse, from the SDSS VO service. It receives two inputs: 1) An ascii table with information about the image such as data of the field, name of the fits file or if it is barred or not. 2) A configuration file with the paths where the files needed by the workflow can be found and other paths where to store the files generated by the workflow This workflow extracts the band from the image header, and the info...

Created: 2012-07-26 | Last updated: 2012-09-07

Credits: Susana

Check the content of the Registry for mism... (1)

• Download

This workflow check for tables which are registered in the HELIO registry but not available in the HFC and for tables which are in the UOC but which are not registred.

Created: 2012-07-26

Credits: Anja Le Blanc

Adjusting galaxy parameters using galfit (4)

• Download

This workflow creates galfit configuration files using data from a votable, it runs galfit, its results is added to the votable, it creates new config files for galfit using the previous results, it runs galfit a second time considering galaxies that have and do not have bars in order to adjust the objective parameters and it finally includes the results into the votable. It requires the specification of the columns that contain file names (these files should be accesibles from taverna). If t...

Created: 2012-07-26 | Last updated: 2012-09-07

Credits: Julian Garrido

Attributions: Create configuration files from a template and a votable Run galfit using a votable Create votable from galfit results Create votable from different galfit paramenter adjustments Create galfit configuration files with partition criteria using votable

Create galfit configuration files with par... (1)

• Download

This workflow creates galfit configuration files using a partition criteria. The resulting configuration files are different depending on whether the galaxy has o doesn't have a bar. They are created (one for every row in the votable) using a template whose keys are replaced by data from a votable. Keys must appear also in the vocabulary file and match column names in the votable. A column in the votable must contain the name of the result configuration file. This workflow uses astrotaverna ...

Created: 2012-07-26 | Last updated: 2012-07-26

Credits: Julian Garrido

Create votable from galfit results (4)

• Download

The workflow creates a votable from the results provided by galfit. It returns this table and an aditional table that is joined to the input table. It requires a votable that contains a column with the file name resulting from running galfit and such files must be accesible from taverna. It uses astrotaverna plugin (http://wf4ever.github.com/astrotaverna/) and it has a dependency on stil library (http://www.star.bris.ac.uk/~mbt/stil/).

Created: 2012-07-26 | Last updated: 2012-09-07

Credits: Julian Garrido

Run galfit using a votable (2)

• Download

It runs galfit and adjust the paramenters specified. This workflow has a dependency on the stil library (http://www.star.bris.ac.uk/~mbt/stil/). Galfit is called by a bash script as 'galfit'. Galfit is called for every row in the votable. Columns where the result file name and the configuration file name are defined must be especified. These files should be accesibles from taverna. ExperimentFolder provides the root folder for the experiment. If the configuration files contain references to o...

Created: 2012-07-26 | Last updated: 2012-09-07

Credits: Julian Garrido

Ajusting galaxy paramenters using sextractor (5)

• Download

This workflow creates configuration files for sextractor, it runs sextractor using this configuration files, it adds sextractor results to the input votable and adds new calculated columns. This task requires a votable as input, a template, a vocabulary and the specification of the column names that contain some required files (configuration files, image files, ...). These files must be accesible from taverna. Sextractor is called by an bash script as 'sex'. Every row in the votable cotains ...

Created: 2012-07-26 | Last updated: 2012-09-07

Credits: Julian Garrido

Attributions: Create configuration files from a template and a votable Run sextractor using a votable Create votable from sextractor results Add columns to a votable resulting from executing sextractor.

Create votable from sextractor results (2)

• Download

The workflow creates a votable from the results provided by sextractor (votables). It returns this table and an aditional table that is joined to the input table. It requires a votable that contains a column with the file name resulting from running sextractor and such files accesible from taverna. It uses astrotaverna plugin (http://wf4ever.github.com/astrotaverna/).

Created: 2012-07-26 | Last updated: 2012-08-21

Credits: Julian Garrido

Run sextractor using a votable (2)

• Download

It runs sextractor and adjust the paramenters specified. This workflow has a dependency on the stil library (http://www.star.bris.ac.uk/~mbt/stil/). Sextractor is called by an bash script as 'sex'. Sextractor is called for every row in the votable. Columns where the configuration file and the image file name are defined must be especified. These files should be accesibles from taverna. ExperimentFolder provides the root folder for the experiment. If the configuration files contain refer...

Created: 2012-07-26 | Last updated: 2012-09-07

Credits: Julian Garrido

13C NMR spectra prediction (2)

• Download

This workflow can be used to predict the 13C NMR spectra of a molecule. The generation of the structure of the molecule is done using the IUPAC to Structure node that uses OPSIN to convert the name of the molecule to a structure. Alternativelly, one can read the structure from a file. The spectra prediction is based on the NMRShiftDB implementation and the data used is also from NMRShiftDB. The atom topological environments were represented as Atom Signatures and used to calculate the checmia...

Created: 2012-07-26 | Last updated: 2012-08-10

Credits: Ldpf

Create configuration files from a template... (1)

• Download

This workflow uses astrotaverna artifacts. It creates files by using a template whose keys are replaced by data from a votable. A configuration file is created for every row in the votable. The keys must appear also in the vocabulary file and match column names in the votable. A column in the votable must contain the name of the result configuration file.

Created: 2012-07-26 | Last updated: 2012-09-04

Credits: Julian Garrido

View Download

Task Data

Created: 2012-07-25 15:40:43 | Last updated: 2012-07-25 15:41:08

1 item in this pack

Comments: 0 | Viewed: 25 times | Downloaded: 11 times

View Download

Presentation - Advances in Digital Scholarship

Created: 2012-07-25 10:29:46 | Last updated: 2012-07-25 13:12:21

2 items in this pack

Comments: 0 | Viewed: 15 times | Downloaded: 6 times

This Pack has no tags!

Check the content of the Registry for mism... (1)

• Download

This workflow check for tables which are registered in the HELIO registry but not available in the UOC and for tables which are in the UOC but which are not registred.

Created: 2012-07-25

Credits: Anja Le Blanc

Check registry for wrongly registed and un... (2)

• Download

HELIO registry contains a list of tables available in the HEC. The HEC contains a table with available talbes itself. This workflow shows the differences between these two lists.

Created: 2012-07-24 | Last updated: 2012-07-24

Credits: Anja Le Blanc

View Download

Process for the preparation of amorphous atorvastati...

Created: 2012-07-24 12:07:03

Credits: Drkrishnasarmapathy

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Adobe PDF

Comments: 0 | Viewed: 49 times | Downloaded: 112 times

This File has no tags!

View Download

Novel polymorph of 5-cyanopthalide high purity inter...

Created: 2012-07-24 12:02:16

Credits: Drkrishnasarmapathy

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Adobe PDF

Comments: 0 | Viewed: 50 times | Downloaded: 123 times

View Download

Enantioselective method of synthesizing methylphenid...

Created: 2012-07-24 11:51:52

Credits: Drkrishnasarmapathy

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Adobe PDF

Comments: 0 | Viewed: 54 times | Downloaded: 76 times

View Download

Quality Assurance and GMP and ICH

Created: 2012-07-24 11:46:03

Credits: Drkrishnasarmapathy

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Adobe PDF

Comments: 0 | Viewed: 24 times | Downloaded: 22 times

This File has no tags!

View Download

GLIBENCLAMIDE Complexes ( Complexes of Mg,Cr,Ni,Zn a...

Created: 2012-07-24 11:33:50 | Last updated: 2012-07-24 11:33:51

Credits: Drkrishnasarmapathy

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Adobe PDF

Comments: 0 | Viewed: 26 times | Downloaded: 29 times

This File has no tags!

View Download

HOW TO START ANALYTICAL METHOD DEVELOPMENT

Created: 2012-07-24 11:28:31

Credits: Drkrishnasarmapathy

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Adobe PDF

Comments: 0 | Viewed: 255 times | Downloaded: 856 times

This File has no tags!

View Download

DEFINITION “IMPURITY”

Created: 2012-07-24 11:18:54

Credits: Drkrishnasarmapathy

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Adobe PDF

Comments: 0 | Viewed: 20 times | Downloaded: 18 times

This File has no tags!