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Random Forest based Feature Weightage (1)

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Features can be assigned weightage through the random forest model. In this regard, RapidMiner's Auto Model comes quite handy. Divide the original data into training and testing datasets before applying the workflow to it.  

Created: 2020-06-30 | Last updated: 2020-06-30

Credits: Imran Ali Syed

Gradient Boosting Trees based Feature Weig... (1)

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Features can be assigned weightage through the gradient boosting trees model. In this regard, RapidMiner's Auto Model comes quite handy. Divide the original data into training and testing datasets before applying the workflow to it. 

Created: 2020-06-30 | Last updated: 2020-06-30

Credits: Imran Ali Syed

CHART based Feature Weightage (1)

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Features can be assigned weightage through the decision tree model. In this regard, RapidMiner's Auto Model comes quite handy. Divide the original data into training and testing datasets before applying the workflow to it. 

Created: 2020-06-30 | Last updated: 2020-06-30

Credits: Imran Ali Syed

cutadapt+BWA-MEM-mis1-i2,2-gapex2,2+filter... (1)

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This workflow is designed to genotype trinucleotide repeats from sequencing reads that span the repeat and its flanksDetailed description as follows:1. Input fastq sequencing reads files (Galaxy tool: Input dataset)Input files for the workflow are single-end MiSeq reads (R1 produced using the protocol from Ciosi et al. 2018) or PacBio reads of insert (ROI) in fastq files format.2. Removing Illumina sequencing adaptor sequence in 3’ of the MiSeq reads (Galaxy tool: Cutadapt 1.16)Cutadapt...

Created: 2020-06-01 | Last updated: 2020-06-01

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Complexity Isosteres

Created: 2020-04-27 13:28:21

Credits: Insilicoconsulting

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: text/csv

Comments: 0 | Viewed: 94 times | Downloaded: 5 times

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Isosteric transform library

Created: 2020-04-27 13:23:39 | Last updated: 2020-04-27 13:29:56

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deneme (1)

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Created: 2020-04-27

Credits: mevlüt Aydemir BAIBU

Deriving factual information from WHO COVI... (1)

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 WHO has posted a CSV that's frequently updated with COVID abstracts. A simple PubMed search reveals thousands of abstracts too. So here's an NLP pipeline to mine these and extract meaningful sentences/facts using Stanford Open Information Extractor and Biological entity tagging. #knime #naturallanguageprocessing #textanalytics #textmining #covid19 #nlp #datascience #WHO 

Created: 2020-04-12

Credits: Insilicoconsulting

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Knime Data Table for Antiviral activity multiclass P...

Created: 2020-03-25 06:18:32

Credits: Insilicoconsulting

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Trident (Package)

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Antiviral activity multiclass Predictor (1)

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A simple multi-class antiviral activity predictor based on expanded Pubchem fingerprints and random forest algorithm. Seems to work well to perform quick screens for antiviral molecules.Download training data from CTD (http://ctdbase.org/downloads/) or  use this preprocessed version https://www.myexperiment.org/files/2285.html. Write to me at rajeev.gangal@gmail.com regarding any queries.I make no claim that the predictive model is accurate for clinical hypotheses or that it will find mo...

Created: 2020-03-23 | Last updated: 2020-03-25

Credits: Insilicoconsulting