User: Yosr Bouhlal

Name: Yosr Bouhlal

Joined: Monday 14 June 2010 17:26:39 (UTC)

Last seen: Monday 25 July 2011 18:39:20 (UTC)

Email (public): yosr.bouhlal [at] gmail.com

Website: Not specified

Location: Vermillion SD, United States

2 Friends

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1 Group (member)

3 Workflows

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Yosr Bouhlal has been credited 4 times

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Interests:

Bioinformatics
Molecular Biology
Human Genetics
Human diseases
Neurogenetics

Field/Industry: USD

Occupation/Role(s): Postdoctoral Fellow

Organisation(s):

Computer Science Department
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Workflow

BioExtract Server

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Yosr Bouhlal

Biomart SNP (1)

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Created: 2011-06-20 | Last updated: 2011-07-05

Credits: Yosr Bouhlal

Workflow

BioExtract Server

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Yosr Bouhlal

Phylogenetic analysis workflow (1)

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This workflow provides a simple phylogenetic analysis starting from a protein query using "MrBayes" program and according to the maximum likelihood model

Created: 2011-03-12 | Last updated: 2011-03-12

Credits: Yosr Bouhlal

Workflow

BioExtract Server

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Yosr Bouhlal

Sacs Gene Muation Analysis (1)

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This workflow was created to predict the effect of the mutation on the primary and the secondary structure of a mutated sacsin protein. The genomic sequence bearing the mutation should be pasted on FASTA format as input for the Transeq tool. This sequence will be translated to protein and compared to the wild type protein, already extracted from NCBI database, through the Supermatcher tool. Variation(s) will be verified by multiple alignment using Blastp and ClustalW tools. Prediction of th...

Created: 2010-11-03 | Last updated: 2010-11-03

Credits: Yosr Bouhlal

Workflow

BioExtract Server

Uploader

Kendra Giesey

Protein Mutation Analysis Using the BioExt... (1)

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This workflow, created using the BioExtract Server, contains a protein query (using the NCBI Protein Database), Blastp, ClustalW, Transeq, Garnier, PepWindowWall, PepInfo, and Octanol. For this workflow, a mutated protein sequence needs to be selected. Once the corresponding non-mutated sequence has been queried, the Blastp tool can be used to find sequences similar to the one queried, and the ClustalW tool can be used to analyze whether the mutation is conserved within species. The Tra...

Created: 2010-07-22 | Last updated: 2010-07-22

Credits: Kendra Giesey Yosr Bouhlal BioExtract Server for Genomics

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