myExperiment - Content

« Previous 1 … 4 5 6 7 8 Next »

Results per page:

Sort by:

Showing 80 results. Use the filters on the left and the search box below to refine the results.

Tag: example

Licence: by-sa

Remove all filters

Taverna 2

Uploader

Katy Wolstencroft

EBI_InterproScan_NewServices (2)

Download

This workflow performs an interproscan on provided sequencesThis workflow performs an interproscan at the EBI on sequences provided as input. The output is provided as text, xml or png. This workflow uses the new EBI services, which are asynchronous and require looping over the nested workflow (Status) until the workflow has finished. Many of the EBI services now work in this way, so you can use this workflow as an example of the invocation pattern and looping configuration.

Created: 2011-01-17 | Last updated: 2011-01-17

Credits: Katy Wolstencroft Hamish McWilliam Stian Soiland-Reyes

Attributions: EBI_InterProScan for Taverna 2 EBI_InterProScan for Taverna 2 EBI_InterProScan

Taverna 2

Uploader

Katy Wolstencroft

retry-example (1)

Download

This workflow executes a local beanshell script that has been programmed to fail on some iterations. It demonstrates the advantages of setting retries in your workflows to make them more robust

Created: 2010-11-08 | Last updated: 2010-11-08

Credits: Alan Williams

Taverna 2

Uploader

Jorgejesus

Async WPS example (2)

Download

Example on how to work with an async service, where the statusURL is used to check for Example on how to work with an async service, where the statusURL is used to check for if the process has finished or not

Created: 2010-11-04 | Last updated: 2011-04-27

Credits: Jorgejesus

Taverna 2

Uploader

Jorgejesus

Polygon buffer - Using pyWPS (1)

Download

Basic example on how to integrate a Web Processing Service (WPS) using PyWPS's WSDL/SOAP The workflow will accept a GML file with featureCollection where polyon is described using gml:coordinate element structure. This GMl is easely generated with GDAL. The coodinate structure will be converted to WKT and used to create a polygon using shapely, the output will be a buffer polygon with a defined width. Output polygon will replace the orginal polygon and the existing XML will be return...