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Items tagged with "test" (28)

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Files (2)
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Blob A Test of myExperiment's file uploading

Created: 06/08/08 @ 18:22:53

Credits: User Yiming Sun

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This is very neat.  Bold, Italics, Underlined, and Strikethru  

File type: Plain text

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Blob test file

Created: 25/02/11 @ 14:26:20 | Last updated: 25/02/11 @ 14:26:21

Credits: User John Brookes

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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File type: Plain text

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Groups (2)
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Network-member Astro collaboration test

Unique name: astrocollab
Created: Monday 28 July 2008 @ 09:10:33 (UTC)

Quick test of Group collaboration for Andy L.

5 shared items   |   0 announcements

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Network-member Test group


Created: Friday 25 February 2011 @ 14:35:41 (UTC)

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2 shared items   |   0 announcements

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Packs (3)
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Pack A test pack of stuff


Created: 09/02/09 @ 16:33:33 | Last updated: 09/02/09 @ 16:34:03

Testing what I can do with packs.

1 item in this pack

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Pack test pack


Created: 27/02/09 @ 15:18:28 | Last updated: 27/02/09 @ 15:18:43

my test pack

0 items in this pack

Comments: 0 | Viewed: 17 times | Downloaded: 14 times

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Pack Pack


Created: 18/03/12 @ 18:12:15 | Last updated: 18/03/12 @ 18:15:55

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2 items in this pack

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Workflows (21)
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Workflow ExampleWorkflow1 (2)

Created: 04/02/08 @ 14:19:24 | Last updated: 04/02/08 @ 15:52:46

Credits: User Katy Wolstencroft

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflow was created based on the Leeds Taverna Workshop 2008-02-04 material developed by Katy.

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Workflow interpro_scan_3.xml (1)

Created: 12/07/08 @ 10:44:19 | Last updated: 12/07/08 @ 10:45:22

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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No description

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Workflow Sample makefile workflow (1)

Created: 30/10/08 @ 09:07:32 | Last updated: 30/10/08 @ 09:10:56

Credits: User Giovanni Dall'Olio

License: Creative Commons Attribution-Share Alike 3.0 Unported License

A sample makefile workflow. Type 'make help' to print an help message. Nothing else is supported in this version. Interesting links about makefiles in bioinformatics: http://www.nodalpoint.org/2007/03/18/a_pipeline_is_a_makefile http://swc.scipy.org/lec/build.html

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Workflow Sample grid workflow (1)

Created: 24/10/08 @ 14:30:25 | Last updated: 31/10/08 @ 12:13:23

Credits: User Glatard

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This is a sample workflow submitting jobs to the EGEE grid using the Generic Application Service Wrapper (GASW). The job submission service has to be installed locally.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 1 | Citations: 0

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Workflow GWorkflowDL: Simple Test Workflow (1)

Created: 25/11/08 @ 13:17:49

Credits: User Andreas Hoheisel

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This is a trivial test workflow modeled using the Grid Workflow Description Language (GWorkflowDL), which can be executed by means of the Grid Workflow Execution Service (GWES).

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

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Workflow TextGrid: Test workflow (on ingrid) (1)

Created: 17/12/08 @ 09:56:52

Credits: User Andreas Hoheisel

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Test workflow that invokes CRUD read on ingrid.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

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Workflow chicken_ensembl_gene_id (1)

Created: 07/09/09 @ 15:00:01 | Last updated: 09/09/09 @ 14:21:48

Credits: User Rory

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Accepts a chromosome eg. 1 and returns the ensembl gene ids for that chromosome

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Viewed: 49 times | Downloaded: 38 times

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Workflow Test of accessing Prolog from Bioclipse (1)

Created: 29/10/09 @ 18:17:24 | Last updated: 29/10/09 @ 18:27:44

Credits: User

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This is a test of accessing Prolog from Bioclipse, using a "Rule of five" prolog example, available at http://gist.github.com/221649 The functionality is implemented in the Blipkit integration plugin for Bioclipse, which is available at: http://github.com/samuell/bioclipse.blipkit Bioclipse itself is available from: http://www.bioclipse.net

Rating: 4.0 / 5 (1 rating) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 1 time | Downloaded: 4 times

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Workflow EBI_InterProScan for Taverna 2 (1)

Created: 08/07/10 @ 09:27:34 | Last updated: 08/07/10 @ 09:27:35

Credits: User Benb

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Perform an InterProScan analysis of a protein sequence using the EBI’s WSInterProScan service (see http://www.ebi.ac.uk/Tools/webservices/services/interproscan). The input sequence to use and the user e-mail address are inputs, the other parameters for the analysis (see Job_params) are allowed to default. InterProScan searches a protein sequence against the protein family and domain signature databases integrated into InterPro (see http://www.ebi.ac.uk/interpro/). A set of matches to the s...

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Workflow Test for SURFconext (1)

Created: 28/01/11 @ 10:50:09 | Last updated: 28/01/11 @ 10:50:11

Credits: User Paulcwvandijk

License: Creative Commons Attribution-Share Alike 3.0 Unported License

No description

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 8 times | Downloaded: 9 times

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Workflow [untitled] (1)

Created: 27/02/11 @ 19:36:31 | Last updated: 27/02/11 @ 19:36:52

Credits: User Jorgejesus

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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gdalinfo test

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Viewed: 19 times | Downloaded: 16 times

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Workflow WPS orchestration example, image metadata ... (1)

Created: 03/03/11 @ 09:26:24 | Last updated: 03/03/11 @ 09:26:28

Credits: User Jorgejesus

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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1 image inputs (GeoTIFF, JPEG,PNG), metadata from gdalinfo and histogram analisys, histogram result is a PNG image in base64 coding (default WPS service encoding) that will be converted to binary.

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Workflow [untitled] (1)

Created: 19/06/11 @ 16:16:21 | Last updated: 19/06/11 @ 16:16:50

Credits: User Merdmann

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This is simly a test fortest

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Workflow Mp3 To Wav Migrate QA CLI List Test (4)

Created: 05/11/12 @ 11:43:51 | Last updated: 13/11/12 @ 10:54:26

Credits: User Bolette Jurik

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Migrates Mp3 files from input List to Wav files and performs QA. The QA steps include File Format Validation, Significant Property Comparison and migrationQA file content comparison (all CLI). As this is a Test workflow, the (very large) Wav files are deleted, and only the QA results and log files are saved for analysis. This workflow matches solution SO4 on the SCAPE opf wiki, see http://wiki.opf-labs.org/display/SP/SO4+Audio+mp3+to+wav+Migration+and+QA+Workflow

Rating: 0.0 / 5 (0 ratings) | Versions: 4 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 43 times | Downloaded: 18 times

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Workflow workflow to test Rshell (for internal purp... (1)

Created: 21/01/13 @ 16:46:25 | Last updated: 11/03/13 @ 13:50:13

Credits: User Eleni

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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 This is a workflow to test if Rserve is working properly, for internal purposes.  Takes as input two integers. output is the sum of integer 1 and integer 2  

Rating: 4.0 / 5 (1 rating) | Versions: 1 | Reviews: 0 | Comments: 1 | Citations: 0

Viewed: 27 times | Downloaded: 10 times

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Workflow Imagemagick convert - tiff2tiff - compression (2)

Created: 08/07/13 @ 14:50:13 | Last updated: 08/07/13 @ 14:55:35

Credits: User Markus Plangg

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Converts tiff to tiff using imagemagick convert with the provided compression

Rating: 0.0 / 5 (0 ratings) | Versions: 2 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 4 times | Downloaded: 3 times

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Project Biovel

Workflow Biome-BGC ESI Regulation, test & demo vers... (1)

Created: 12/08/13 @ 12:20:48 | Last updated: 12/08/13 @ 12:26:14

Credits: User Ferenc HORVATH User Zoltan BARCZA User Dora Krasser User Peter Ittzes Network-member BioVeL

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Biome-BGC is a process-based biogeochemical model that can be used to simulate carbon, nitrogen and water pools and fluxes of different terrestrial ecosystems. The BBGC Ecosystem Service Indicators (ESI) Regulation executes a single simulation run, which consists of a so called spinup and normal simulation phases pipelined, than quantifies and derives important ecosystem service indicator measures. The simulations require specific parameter inputs like: - SPINUP and NORMAL initialization f...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

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3463?size=60x60 Gab

Workflow SimpleTest (1)

Created: 28/01/14 @ 14:55:04 | Last updated: 28/01/14 @ 14:56:09

Credits: User Gab

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This is a simple test workflow. It has only one node that takes an input (a string) and return a string of the form processed(input).

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 4 times | Downloaded: 2 times

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Workflow Imagemagick convert - tiff2tiff - compression (1)

Created: 14/02/14 @ 10:03:56

Credits: User Markus Plangg

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Converts tiff to tiff using imagemagick convert with the provided compression

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 1 time | Downloaded: 2 times

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Workflow Imagemagick convert - image2tiff - compres... (1)

Created: 14/02/14 @ 10:23:34

Credits: User Markus Plangg

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Converts images supported by imagemagick to tiff using imagemagick convert with the provided compression

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 7 times | Downloaded: 1 time

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