Workflow Entry: Get KEGG gene descriptions and pathways

Created at: 30/04/10 @ 16:09:29      Last updated: 30/04/10 @ 16:12:02
Information Version 1 (of 1)

Version created on: 30/04/10 @ 16:09:29 by: Nadia Cerezo   |   Revision comments Expand

Last edited on: 30/04/10 @ 16:12:03 by: Nadia Cerezo

Title: Get KEGG gene descriptions and pathways

Type: Taverna 2


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Information Description

This workflow takes a list of KEGG gene identifiers and supplies descriptions associated to said genes + pathways including all genes and the descriptions associated to said pathways.

The list_to_string local beanshell scripts merely transform a given list into a string of unique not-null elements separated by new lines (for batch btit use).

Note that the input is a real taverna list : multiple values must be declared as multiple values instead of a single string value with distinct identifiers separated by new lines.

This workflow is a slight modification of one made by Paul Fisher called "Get Kegg Gene information".


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Information Workflow Components

Information Authors (2)
Information Titles (2)
Information Descriptions (4)
Inputs (1)
Processors (5)
Beanshells (2)
Outputs (2)
Datalinks (7)
Coordinations (0)

Information Workflow Type

Taverna 2

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Version History

Earliest Version:
[1] - Get KEGG gene descriptions and pathways

Created on: Friday 30 April 2010 @ 16:09:29 (GMT)

Created by: Nadia Cerezo

Last edited on: Friday 30 April 2010 @ 16:12:03 (GMT)

Last edited by: Nadia Cerezo

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This Workflow only has one version.



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Non-Information Resource URI: http://www.myexperiment.org/workflows/1237


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