Version 1
(of 1)
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Version created on:
30/04/10 @ 16:09:29
by:
Nadia Cerezo
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Revision comments
Last edited on: 30/04/10 @ 16:12:03 by: Nadia Cerezo
Title: Get KEGG gene descriptions and pathways
Type: Taverna 2
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Description
This workflow takes a list of KEGG gene identifiers and supplies descriptions associated to said genes + pathways including all genes and the descriptions associated to said pathways.
The list_to_string local beanshell scripts merely transform a given list into a string of unique not-null elements separated by new lines (for batch btit use).
Note that the input is a real taverna list : multiple values must be declared as multiple values instead of a single string value with distinct identifiers separated by new lines.
This workflow is a slight modification of one made by Paul Fisher called "Get Kegg Gene information".
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http://www.myexperiment.org/workflows/1237/download?version=1
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[1] - Get KEGG gene descriptions and pathways
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Original Uploader |
Created: 29/09/08 @ 13:21:12 | Last updated: 29/09/08 @ 13:23:39
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Used for searching entries by keywords. User needs to specify a database from those which are supported by DBGET system before keywords. List of databases available at : http://www.genome.jp/dbget/
Example of input parameter: gb E-cadherin human
Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 40 times | Downloaded: 16 times Tags (1): |
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Original Uploader |
Created: 26/12/08 @ 07:52:41 | Last updated: 26/12/08 @ 07:53:11
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
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Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 75 times | Downloaded: 13 times This Workflow has no tags! |
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Linked Data
Non-Information Resource URI: http://www.myexperiment.org/workflows/1237
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Copyright © 2007 - 2011 The University of Manchester and University of Southampton
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