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Items tagged with "Kegg Pathways" (4)

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Network-member metabolomics

Created: Thursday 29 November 2007 @ 11:50:47 (GMT)

Data analysis and bioinformatics of metabolomic studies

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Taverna 1

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Workflow DataBiNS - Data Mining Workflow for Biological Pathways and Non-Synonymous SNPs (v2)

Created: 04/12/07 @ 23:43:03 | Last updated: 04/12/07 @ 23:45:25

Credits: User Fong Chun Chan

License: Creative Commons Attribution-Share Alike 3.0 License

Databins_with_kegg_pathways_20321_2
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Rating: 0.0 / 5 (0 ratings) | Versions: 2 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 819 times | Downloaded: 681 times

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Taverna 1

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Workflow keggID to Kegg pathways with BioMoby services (v3)

Created: 03/10/07 @ 18:36:22 | Last updated: 05/03/08 @ 13:59:56

License: Creative Commons Attribution-NoDerivs 3.0 License

Keggid_to_kegg_pathways_with_biomoby_services_13382_3
This workflow retrieves KEGG pathway id and image given a KEGG gene id. e.g hsa:6402 or eco:b0002

Rating: 4.0 / 5 (1 rating) | Versions: 3 | Reviews: 0 | Comments: 2 | Citations: 0

Viewed: 752 times | Downloaded: 724 times

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Taverna 1

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Workflow Escherichia coli : From cDNA Microarray Raw Data to Pathways and Published Abstracts (v1)

Created: 08/05/08 @ 15:25:30 | Last updated: 12/05/08 @ 09:01:39

Credits: User Saeedeh User Paul Fisher

Attributions: Workflow HUMAN Microarray CEL file to candidate pathways

License: Creative Commons Attribution-Share Alike 3.0 License

Escherichia_coli___from_cdna_microarray_raw_data_to_pathways_and_published_abstracts_6837_1
This workflow takes in a CDNA raw file and a normalisation method then returns a series of images/graphs which represent the same output obtained using the R and bioconductor. Also retruned by this workflow are a list of the top differentialy expressed genes (size dependant on the number specified as input - geneNumber), which are then used to find the candidate pathways which may be influencing the observed changes in the microarray data. By identifying the candidate pathways, more detailed...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

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