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Mariebrown

metabolomics

Created: Thursday 29 November 2007 @ 11:50:47 (GMT)

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Fong Chun Chan

DataBiNS - Data Mining Workflow for Biological Pathways and Non-Synonymous SNPs (v2)

Created: 04/12/07 @ 23:43:03 | Last updated: 04/12/07 @ 23:45:25

Credits: Fong Chun Chan

License: Creative Commons Attribution-Share Alike 3.0 License

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Rating: 0.0 / 5 (0 ratings) | Versions: 2 | Reviews: 0 | Comments: 0 | Citations: 0

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Original Uploader

Saeedeh

Escherichia coli : From cDNA Microarray Raw Data to Pathways and Published Abstracts (v1)

Created: 08/05/08 @ 15:25:30 | Last updated: 12/05/08 @ 09:01:39

Credits: Saeedeh Paul Fisher

Attributions: HUMAN Microarray CEL file to candidate pathways

License: Creative Commons Attribution-Share Alike 3.0 License

This workflow takes in a CDNA raw file and a normalisation method then returns a series of images/graphs which represent the same output obtained using the R and bioconductor. Also retruned by this workflow are a list of the top differentialy expressed genes (size dependant on the number specified as input - geneNumber), which are then used to find the candidate pathways which may be influencing the observed changes in the microarray data. By identifying the candidate pathways, more detailed...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

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