Workflow Entry: EBI_NCBI_BLAST

Created at: 31/05/08 @ 08:38:46      Last updated: 06/12/10 @ 10:54:16
Information Version 1 (of 1)

Version created on: 31/05/08 @ 08:38:46 by: Hamish McWilliam

Last edited on: 06/12/10 @ 10:54:16 by: Hamish McWilliam

Title: EBI_NCBI_BLAST

Type: Taverna 1


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Perform a BLAST search using the EBI’s WSNCBIBlast service (see http://www.ebi.ac.uk/Tools/webservices/services/ncbiblast). The query sequence, database to search and BLAST program to use are inputs, the other parameters for the search (see Job_params) are allowed to default.

Note: the WSNCBIBlast service used by this workflow is deprecated as of 21st September 2010 and should not be used in any new development. This service is will be retired during 2011. EBI's replacement NCBI BLAST services (REST or SOAP) should be used instead.

 


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Taverna 1

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Workflow Other workflows that use similar services (3)

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Original Uploader

Workflow EBI_NCBI_BLAST_with_prompts (1)

Created: 31/05/08 @ 08:40:29 | Last updated: 06/12/10 @ 10:55:09

Credits: User Hamish McWilliam

Attributions: Workflow EBI_NCBI_BLAST

License: Creative Commons Attribution 3.0 Unported License

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Run a BLAST analysis using the EBI’s WSNCBIBlast service (see http://www.ebi.ac.uk/Tools/webservices/services/ncbiblast). This workflow wraps the EBI_NCBI_BLAST workflow to provide a basic user interface which prompts for the required inputs: sequence, database, BLAST program and user e-mail. Other parameters (e.g. matrix, sort, gap penalties, etc.) are allowed to default. Note: the WSNCBIBlast service used by this workflow is deprecated as of 21st September 2010 and should not be use...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 162 times | Downloaded: 110 times

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Non-Information Resource URI: http://www.myexperiment.org/workflows/201


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