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InviteWorkflow Entry: Multiple Blastp
| Citations (0) | Version History | Reviews (0) | Comments (1) |
 Version 2 (latest)
(of 2)
|
Version created on:
20/11/07 @ 16:58:38
by:
Kieren Lythgow
|
Revision comments 
Last edited on: 10/01/08 @ 12:09:38 by: Kieren Lythgow
Title: Multiple Blastp
Type: Taverna 1
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Description
This is a workflow to automate multiple BLASTp jobs on a large list of protein sequences in FASTA format.
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Run this Workflow in the Taverna Workbench...
Option 1:
Launch in TavernaNote: you need to have both the WHIP Launcher and the Taverna myExperiment/WHIP plugin installed on your machine for this to work. See here for information.
Option 2:
Copy and paste this link into File > 'Open workflow location...'
http://www.myexperiment.org/workflows/90/download?version=2
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Earliest Version:
[1] - Multiple Blastp
Latest Version:
[2] - Multiple Blastp
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Original Uploader |
Created: 01/09/10 @ 17:16:24 | Last updated: 01/09/10 @ 17:18:45
Credits:
Attributions:
License: Creative Commons Attribution-Share Alike 3.0 Unported License
retrieve protein sequence and do a high speed BLAST from DDBJ Web services
informations on Web services available at http://xml.nig.ac.jp/index.html
example
accession : Q9NRA8
database : ddbjbct
program : tblastn
param : -b 100 -v 100
Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 19 times | Downloaded: 13 times Tags (6): |
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Original Uploader |
Created: 15/04/08 @ 15:13:54
Credits:
License: Creative Commons Attribution-Share Alike 3.0 Unported License
No description
Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 52 times | Downloaded: 0 times This Workflow has no tags! |
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Linked Data
Non-Information Resource URI: http://www.myexperiment.org/workflows/90
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Copyright © 2007 - 2011 The University of Manchester and University of Southampton
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need sample input to try this out, please
thx -Paolo