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Showing 4527 results. Use the filters on the left and the search box below to refine the results.
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Avatar My Mohd Saberi
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Blob Inferring E. coli SOS Response Pathway from Gene Exp...

Created: 2013-05-31 02:59:33

Credits: User Mohd Saberi

License: Creative Commons Attribution-Share Alike 3.0 Unported License

L.E. Chai, M.S. Mohamad, S.Deris, C.K. Chong, Y.W. Choon, “Inferring E. coli SOS Response Pathway from Gene Expression Data Using IST-DBN with Time Lag Estimation”, International Symposium on Biomedical Data Infrastructure (BDI 2013), University of Malaya, Kuala Lumpur, Malaysia, 27-28 February 2013. 

File type: Adobe PDF

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Blob A Hybrid of SVM and SCAD with Group-specific Tuning ...

Created: 2013-05-31 02:58:54

Credits: User Mohd Saberi

License: Creative Commons Attribution-Share Alike 3.0 Unported License

M.F. Misman, W.H. Chan, M.S. Mohamad, S.Deris, “A Hybrid of SVM and SCAD with Group-specific Tuning Parameters in Identification of Informative Genes and Biological Pathways”, The First International Workshop on Data Analytics for Targeted Healthcare (DANTH 13), Gold Coast, Australia, 14-17 April 2013.

File type: Adobe PDF

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Blob Identifying Gene Knockout Strategy Using Bees Hill F...

Created: 2013-05-31 02:58:12

Credits: User Mohd Saberi

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Y.W. Choon, C.K. Chong, L.E. Chai, M.S. Mohamad, S.Deris, R.M Illias, “Identifying Gene Knockout Strategy Using Bees Hill Flux Balance Analysis  (BHFBA) for Improving the Production of Succinic Acid and Glycerol in Saccharomyces cerevisiae”, The First International Workshop on Data Analytics for Targeted Healthcare (DANTH 13), Gold Coast, Australia, 14-17 April 2013.

File type: Adobe PDF

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Blob A Constraint and Rule In an Enhancement of Binary Pa...

Created: 2013-05-31 02:57:36

Credits: User Mohd Saberi

License: Creative Commons Attribution-Share Alike 3.0 Unported License

 M.S. Mohamad, S. Omatu, S. Deris, M. Yoshioka, “A Constraint and Rule In an Enhancement of Binary Particle Swarm Optimization To Select Informative Genes For Cancer Classification”, The First International Workshop on Data Analytics for Targeted Healthcare (DANTH 13), Gold Coast, Australia, 14-17 April 2013.

File type: Adobe PDF

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Blob Multiclass Prediction for Cancer Microarray Data Usi...

Created: 2013-05-31 02:56:51

Credits: User Mohd Saberi

License: Creative Commons Attribution-Share Alike 3.0 Unported License

K. Moorthy, M.S. Mohamad, S. Deris, “Multiclass Prediction for Cancer Microarray Data Using Various Variables Range Reduction Based On Random Forest”, The First International Workshop on Data Analytics for Targeted Healthcare (DANTH 13), Gold Coast, Australia, 14-17 April 2013.

File type: Adobe PDF

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Blob Theronine Biosynthesis Pathway Simulation Using IBMD...

Created: 2013-05-31 02:56:14

Credits: User Mohd Saberi

License: Creative Commons Attribution-Share Alike 3.0 Unported License

C.K. Chong, Y.W. Choon, L.E. Chai, M.S. Mohamad, S.Deris, S. Shamsir, “Theronine Biosynthesis Pathway Simulation Using IBMDE With Parameter Estimation”, The First International Workshop on Data Analytics for Targeted Healthcare (DANTH 13), Gold Coast, Australia, 14-17 April 2013.

File type: Adobe PDF

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Blob Modelling Gene Networks by a Dynamic Bayesian Networ...

Created: 2013-05-31 02:54:18

Credits: User Mohd Saberi

License: Creative Commons Attribution-Share Alike 3.0 Unported License

 L.E. Chai, M.S. Mohamad, S.Deris, C.K. Chong, Y.W. Choon, “Modelling Gene Networks by a Dynamic Bayesian Network-based Model with Time Lag Estimation”, The First International Workshop on Data Analytics for Targeted Healthcare (DANTH 13), Gold Coast, Australia, 14-17 April 2013.

File type: Adobe PDF

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Blob Parameter Estimation Using Improved Differential Evo...

Created: 2013-05-31 02:51:40

Credits: User Mohd Saberi

License: Creative Commons Attribution-Share Alike 3.0 Unported License

J.X. Yeoh, C.K. Chong, Y.W. Choon, L.E. Chai, M.S. Mohamad, S.Deris, R.M Illias, “Parameter Estimation Using Improved Differential Evolution (IDE) and Bacterial Foraging Algorithm to Model Tyrosine Production in Mus Musculus”, The First International Workshop on Data Analytics for Targeted Healthcare (DANTH 13), Gold Coast, Australia, 14-17 April 2013.

File type: Adobe PDF

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Taverna 2
Uploader
1780?size=60x60 Gb Donal Fellows

Workflow Extract Image Dimensions with SIPS (2)

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Extract the dimensions of an image with SIPS (OSX only)

Created: 2013-05-28 | Last updated: 2013-05-28

Taverna 2
Uploader
1780?size=60x60 Gb Donal Fellows

Workflow Extract PNG dimensions (2)

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First version of a simple PNG characterizer

Created: 2013-05-28 | Last updated: 2013-05-28

Taverna 2
Uploader
1780?size=60x60 Gb Donal Fellows

Workflow Convert TIFF to PNG (3)

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Convert a TIFF to a PNG. Note that the semantic description is currently wrong due to a bug in the component plugin.

Created: 2013-05-28 | Last updated: 2013-05-28

Taverna 2
Uploader
1217?size=60x60 Gb Alan Williams

Workflow Fundamental matrix (1)

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This component calculates the fundamental matrix from a stage matrix

Created: 2013-05-28

Taverna 2
Uploader
1217?size=60x60 Gb Alan Williams

Workflow ref (2)

Thumb
ref

Created: 2013-05-28 | Last updated: 2013-05-28

Creator
1217?size=60x60 Gb Alan Williams
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Pack Population Model Analysis Family


Created: 2013-05-28 09:39:37 | Last updated: 2013-11-14 11:20:52

A family of components that do analysis of population models.

3 items in this pack

Comments: 0 | Viewed: 35 times | Downloaded: 14 times

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1217?size=60x60 Gb Alan Williams
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Blob Population Modelling Analysis Component

Created: 2013-05-28 09:38:35 | Last updated: 2013-11-13 11:20:11

License: Creative Commons Attribution-No Derivative Works 3.0 Unported License

A BioVeL component for analysis of staged matrices

File type: Taverna Component Profile

Comments: 0 | Viewed: 46 times | Downloaded: 17 times

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Taverna 3
Uploader
4036?size=60x60 Gb Luna De Ferrari

Workflow From molecule name to SMILE and InchI usin... (2)

From molecule name to smile and inchi using chemspider. If the name cannot be matched to a chemspider identifier, the molecule name will appear in the results with an empty line. The output is a tab separated file.

Created: 2013-05-21 | Last updated: 2013-05-21

Credits: User Luna De Ferrari

Creator
4030?size=60x60 Bs Dasands
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Pack Collarborative and Interdisciplinary Research in Adu...


Created: 2013-05-16 18:07:20 | Last updated: 2013-05-16 19:24:33

Immediate Items to define:1 -  Definition of Collaborative  and Interdisciplinary Education; Adult Education2.   Problems of Collaborative  and Interdisciplinary Education3.   Methods of Collaborative  and Interdisciplinary Education4.   Implementation of Collaborative  and Interdisciplinary Education

3 items in this pack

Comments: 0 | Viewed: 33 times | Downloaded: 8 times

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4030?size=60x60 Bs Dasands
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Blob Fostering Collaborative and Inter-disciplinary Resea...

Created: 2013-05-16 17:18:53 | Last updated: 2013-05-16 17:37:12

Credits: User Dasands

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This paper was not written by me. It is one that I pulled off of the http://www.sgo.sagepub.com site. This is an area I would like to do further study in and would like the input of any of the MyExperiment members on its content, conclusions, any recommended redirection, etc The Url for the location of where the article was originally published is listed at the beginning of the paper.

File type: Adobe PDF

Comments: 0 | Viewed: 47 times | Downloaded: 197 times

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KNIME
Uploader
Avatar Au sauberns

Workflow Chemical structure extractor - img2structure (1)

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Extracts images of chemical structures from PDFs and converts them to usable structure data using the OSRA binaries.An in-progress (incomplete) workflow.This workflow makes use of the External Tool node to access the OSRA structure recognition binaries.So you must have a functioning installation of OSRA and it's dependencies. This may require advanced compiler knowledge on your platform, and may not be a trivial task.OSRA 1.4 is free for both the source & binary distribution. OSRA 2.0...

Created: 2013-05-14 | Last updated: 2013-05-14

Credits: User sauberns

Attributions: Workflow Chemical term extractor - text2structure

Galaxy
Uploader
Avatar Robsyme

Workflow Variant discovery and reference correction... (1)

Error identification and error correction of reference genome assembly from deep-seq Illumina reads.

Created: 2013-05-14 | Last updated: 2013-05-14

Credits: User Robsyme

Taverna 2
Uploader
4196?size=60x60 Biodiversity eLaboratory
Project Biovel

Workflow BioSTIF Interaction Rastermask (2)

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The Rastermask interaction allows to create a mask from a geiven extent and resolution and store it to the Geoserver for futher computations.This version includes a check if the mask is created when the "continue" button is pushed. The task=createmask parameter must be set to get the check.

Created: 2013-05-13 | Last updated: 2014-09-17

Credits: User Robert Kulawik

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Avatar My Mohd Saberi
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Blob A Two-Step Binary Particle Swarm Optimization Approa...

Created: 2013-05-12 04:43:40

Credits: User Mohd Saberi

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Z.M. Yusof, A.F.Z. Abidin, A. Adam, K. Khalil, J.A.A Mukred, M.S Mohamad, Z. Ibrahim.  (2012). Vol 6, No.3, pp.771-776. .ICIC Express Letters (ICIC-EL). ICIC International. Indexed by SCOPUS.

File type: Adobe PDF

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Avatar My Mohd Saberi
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Blob A Pathway-Based Approach for Analyzing Microarray Da...

Created: 2013-05-12 04:40:38

Credits: User Mohd Saberi

License: Creative Commons Attribution-Share Alike 3.0 Unported License

C.H. Shi, M.S. Mohamad, S. Deris, Z. Ibrahim.  (2012). Vol 6, No.5, pp. 1253-1257. ICIC Express Letters (ICIC-EL). ICIC International. Indexed by SCOPUS.

File type: Adobe PDF

Comments: 0 | Viewed: 16 times | Downloaded: 35 times

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Blob “Aspartate Biosynthesis Pathway Simulation using an...

Created: 2013-05-12 04:34:24

Credits: User Mohd Saberi

License: Creative Commons Attribution-Share Alike 3.0 Unported License

C.K. Chong, M.S. Mohamad, S. Deris, M.S. Shamsir, Y.W. Choon, L.E. Chai, Universiti Malaysia Terengganu 11th International Annual Symposium on Sustainability Science and Management (UMTAS 2012), pp. 956-961, Universiti Malaysia Terengganu, Malaysia, 9-11 July 2012.

File type: Adobe PDF

Comments: 0 | Viewed: 15 times | Downloaded: 8 times

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Blob “Gene Knockout Strategies Identification by using a...

Created: 2013-05-12 04:32:30

Credits: User Mohd Saberi

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Y.W. Choon, M.S. Mohamad , S. Deris, C.K. Chong, L.E. Chai, Universiti Malaysia Terengganu 11th International Annual Symposium on Sustainability Science and Management (UMTAS 2012), pp. 962-968, Universiti Malaysia Terengganu, Malaysia, 9-11 July 2012.

File type: Adobe PDF

Comments: 0 | Viewed: 13 times | Downloaded: 9 times

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