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“The Emerging Field of Synthetic Biology: a Review”

Created: 2013-05-12 04:30:57

Credits: Mohd Saberi

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A Hybrid of Artificial Bee Colony and Flux Balance A...

Created: 2013-05-12 04:27:51

Credits: Mohd Saberi

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Identifying Gene Knockout Strategy Using Bees Hill F...

Created: 2013-05-12 04:26:13

Credits: Mohd Saberi

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Prediction of Vanillin Production in Yeast Using a H...

Created: 2013-05-12 04:25:12

Credits: Mohd Saberi

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Inferring Gene Networks from Gene Expression Data U...

Created: 2013-05-12 04:23:51

Credits: Mohd Saberi

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Using Particle Swarm Optimization for Estimating Kin...

Created: 2013-05-12 04:22:40

Credits: Mohd Saberi

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Using Ant Colony Optimization (ACO) on Kinetic Model...

Created: 2013-05-12 04:21:44

Credits: Mohd Saberi

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Inferring E. coli SOS Response Pathway from Gene Exp...

Created: 2013-05-12 04:20:35

Credits: Mohd Saberi

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Identifying Minimal Genomes and Essential Genes in ...

Created: 2013-05-12 04:19:02

Credits: Mohd Saberi

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Multiple Gene Sets for Cancer Classification Using G...

Created: 2013-05-12 04:17:39

Credits: Mohd Saberi

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Using Bees Hill Flux Balance Analysis (BHFBA) for in...

Created: 2013-05-12 04:16:10

Credits: Mohd Saberi

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Using Bayesian Networks To Construct Gene Regulatory...

Created: 2013-05-12 04:11:21

Credits: Mohd Saberi

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Selecting a Small Subset of Informative Genes from G...

Created: 2013-05-12 04:08:11

Credits: Mohd Saberi

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Protein Secondary Structure Prediction Using Optima...

Created: 2013-05-12 04:06:12

Credits: Mohd Saberi

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Metabolic Pathway Extraction Using Combined Probabil...

Created: 2013-05-12 04:04:21

Credits: Mohd Saberi

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Multivariate Analysis of Gene Expression Data and Mi...

Created: 2013-05-12 04:01:51

Credits: Mohd Saberi

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Investigation on Different Learning Techniques for W...

Created: 2013-05-12 03:58:35

Credits: Mohd Saberi

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An Image Registration Technique To Enhance PCB Insp...

Created: 2013-05-12 03:54:38

Credits: Mohd Saberi

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DNA Sequence Design for DNA Computation based on Bin...

Created: 2013-05-12 03:50:09

Credits: Mohd Saberi

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Random Forest for Gene Selection and Microarray Data...

Created: 2013-05-12 03:46:00

Credits: Mohd Saberi

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A Hybrid of SVM and SCAD with Group-specific Tuning ...

Created: 2013-05-12 03:42:23

Credits: Mohd Saberi

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Inferring Gene Regulatory Networks from Gene Expres...

Created: 2013-05-12 03:41:11

Credits: Mohd Saberi

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Identifying Gene Knockout Strategies Using a Hybrid...

Created: 2013-05-12 03:40:01

Credits: Mohd Saberi

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Parameter Estimation for Simulation of Glycolysis Pa...

Created: 2013-05-12 03:38:46

Credits: Mohd Saberi

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Using an Improved Differential Evolution Algorithm ...

Created: 2013-05-12 03:36:42

Credits: Mohd Saberi

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Optimized Local Protein Structure with Support Vecto...

Created: 2013-05-12 03:35:39

Credits: Mohd Saberi

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Optimized Local Protein Structure with Support Vecto...

Created: 2013-05-12 03:34:57

Credits: Mohd Saberi

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A New Hybrid Firefly Algorithm for Complex and Nonli...

Created: 2013-05-12 03:33:41

Credits: Mohd Saberi

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Reconstructing Metabolic Networks - A Review. Advanc...

Created: 2013-05-12 03:31:42

Credits: Mohd Saberi

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Automation of DNA Computing Readout Method Based on...

Created: 2013-05-12 03:29:28

Credits: Mohd Saberi

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An Improved Swarm Optimization for Parameter Estima...

Created: 2013-05-12 03:27:02

Credits: Mohd Saberi

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Validation of Hierarchical Gene Clusters Using Repea...

Created: 2013-05-12 03:24:34

Credits: Mohd Saberi

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Validation of Hierarchical Gene Clusters Using Repea...

Created: 2013-05-12 03:22:20

Credits: Mohd Saberi

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A Review of Computational Approaches for In Silico M...

Created: 2013-05-12 03:20:56

Credits: Mohd Saberi

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A New Hybrid Bee Evolution Algorithm for parameter E...

Created: 2013-05-12 03:18:27

Credits: Mohd Saberi

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ScientificModules

Created: 2013-05-10 14:08:43

Credits: Khalid Belhajjame

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Pack with versions and relationships

Created: 2013-05-02 08:35:29 | Last updated: 2013-05-02 08:40:06

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Retrieve object properties from NED and VO... (4)

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From an initial list of galaxy names, retrieve some of their properties from Virtual Observatory archives and services (NASA Extragalactic Database NED), and calculate others like Distance, based on the ones previously obtained (e.g. recession velocity, equatorial and galactic coordinates). The sample is filtered in a later step with criteria related to the angular size of the object and its declination. The goal is to build a sample of objects and their properties with up-to-date physical in...

Created: 2013-04-25 | Last updated: 2013-06-27

Perform Multi-SSA queries to an Spectral V... (2)

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Snippet showing how to use AstroTaverna "VO service perspective" and other tools for performing Multi-SSA queries to Spectral VO Services. The input is a VOTable with a list of source names and coordinates to perform the multi-query. Add_n_concat_tables tool is used to concatenate the list of responses issued from the multiquery. The result is a VOTable that may be renderized properly in the perspective Results, choosing Value Type as VOTable. It may also be sent via SAMP to other VO soft im...

Created: 2013-04-23 | Last updated: 2013-04-23

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VOTable of AMIGA Galaxies

Created: 2013-04-23 16:12:52

Credits: Jose Enrique Ruiz

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Trident (Package)

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Retrieve the best position from an object ... (2)

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Snippet showing how to use Taverna REST Service tool for performing a query to a standard REST Service. In this particular case, the query is performed against NED_basic_posn REST Service from NASA Extragalactic Database (NED) Archive for the object M51. The result is a VOTable that may be renderized properly in the perspective Results, choosing Value Type as VOTable. More info on NED Web Serces: http://adsabs.harvard.edu/abs/2007ASPC..382..165M

Created: 2013-04-23 | Last updated: 2013-04-23

Credits: Jose Enrique Ruiz

Perform a SSA query to a Spectral VO Service (1)

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Snippet showing how to use AstroTaverna "VO service perspective" for performing SSA queries on Spectral VO Services. The result is a VOTable that may be renderized properly in the perspective Results, choosing Value Type as VOTable. In this particular case the Spectral Service queried is the Galexy Evolution Explorer (GALEX) SSA Service, with coordinates RA, DEC of 25, 22 and 1 degree in size.

Created: 2013-04-23

Credits: Jose Enrique Ruiz

Perform Multi-SIA queries to an Image VO S... (2)

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Snippet showing how to use AstroTaverna "VO service perspective" and other tools for performing Multi-SIA queries to Image VO Services. The input is a VOTable with a list of source names and coordinates to perform the multi-query. Add_n_concat_tables tool is used to concatenate the list of responses issued from the multiquery. The result is a VOTable that may be renderized properly in the perspective Results, choosing Value Type as VOTable. It may also be sent via SAMP to other VO soft imple...

Created: 2013-04-23 | Last updated: 2013-04-23

Credits: Jose Enrique Ruiz

Perform a SIA query to an Image VO Service (1)

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Snippet showing how to use AstroTaverna "VO service perspective" for performing SIA queries on Image VO Services. The result is a VOTable that may be renderized properly in the perspective Results, choosing Value Type as VOTable. In this particular case the Image Service queried is the Infrared Space Observatory (ISO) Data Archive SIAP Service, with coordinates RA, DEC of 30, 30 and 10 degrees in size.

Created: 2013-04-23

Credits: Jose Enrique Ruiz

Retrieve Bibliography from NED (1)

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This is a smal workflow that retrieves bibliography from Literature NED Web Service http://ned.ipac.caltech.edu/forms/SearchRefsByObjectName.html The input is a list of source names and the output is a VOTable with the info provided by NED, plus an extra column with the link pointing to the bliography in the NED website. This VOTable may be sent to Topcat via SAMP and the content of the "Link column" used as an action to display the website content in a browser when clicked. Note that the o...

Created: 2013-04-23

Credits: Jose Enrique Ruiz

Perform Multi-ConeSearch queries to a VO S... (1)

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Snippet showing how to use AstroTaverna "VO service perspective" and other tools for performing Multi-ConeSearch queries to a VO Services. The input is a VOTable with a list of source names and coordinates to perform the multi-query. Please *note how the AMIGACS block list handling is cofigured* with right click -> Configure running -> List Handling. Add_n_concat_tables tool is used to concatenate the list of responses issued from the multiquery. The result is a VOTable that may be renderiz...

Created: 2013-04-22

Perform a ConeSearch query to a VO Service (2)

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Snippet showing how to use AstroTaverna "VO service perspective" for performing ConeSearch queries on VO Services. The result is a VOTable that may be renderized properly in the perspective Results, coosing Value Type as VOTable.

Created: 2013-04-22 | Last updated: 2013-04-22

Use of temporary files to execute local to... (1)

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Snippet showing how to use AstroTaverna tool "Fill template from VOTable" for creating temporary files filling a template provided by the user. The input is two templates a one VOTable with information on where to store files created from filling the templates. The VOTable also contains data values to fill the templates. This snippet is particularly useful when a local tool needs different configuration files when looping through different executions.

Created: 2013-04-22

Add a common row to a VOTable (1)

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Snippet showing how to use AstroTaverna tool for adding a common row to a whole VOTable. The input are two VOTable, the main one has a lis of sources and coordinates, to which is appended a common row "Object Type" with common values "Messier Object". Right click on tool may change configuration to append the common row to left or right side of main VOTable.

Created: 2013-04-22