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Tell - no parameters (1)

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The tell service displays an informative dialog with no title or message. When the user presses OK the string 'answer' is passed to the answer port of the tell service and so to the output of the workflow.

Created: 2008-09-27

Credits: Alan Williams

String list difference - yielding non-empt... (1)

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The string list difference service takes in ['a','b','c'] and ['a','e','c'] and returns the list ['b','e'].

Created: 2008-09-27

Credits: Alan Williams

Select - title and message parameters (1)

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The split_string_into_string_list_by_regular_expression parses the string 'a,b,c,d,e' and outputs the list ['a','b','c','d','e']. The select service displays a dialog with ''Some title' and 'Some message'. The user is able to select from the values ['a','b','c','d',e']. When the user presses OK the value the user selected is passed to the answer port of the select service and so to the output of the workflow. If the user clicks Cancel then a service failure is generated.

Created: 2008-09-27

Credits: Alan Williams

Select - message parameter (1)

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The split_string_into_string_list_by_regular_expression parses the string 'a,b,c,d,e' and outputs the list ['a','b','c','d','e']. The select service displays a dialog with no title but with 'Some message'. The user is able to select from the values ['a','b','c','d',e']. When the user presses OK the value the user selected is passed to the answer port of the select service and so to the output of the workflow. If the user clicks Cancel then a service failure is generated.

Created: 2008-09-27

Credits: Alan Williams

Pad numeral with leading 0s - too short ta... (1)

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The pad numeral with leading 0s takes the input '12' and because the specified target length of 1 is too short, yields the output '12'.

Created: 2008-09-27

Credits: Alan Williams

Pad numeral with leading 0s - specified ta... (1)

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The pad numeral with leading 0s takes the input '12' and pads it to the specified target length of 4, yielding the output '0012'.

Created: 2008-09-27

Credits: Alan Williams

List files by regex - single answer (1)

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The create_temporary_directory beanshell creates a temporary directory and outputs the path to that directory. The populate_directory beanshell creates several files within the temporary directory. Once the directory has been populated, it is examined by the List_files_by_regex service and the file path to the one file matching 'c.*' i.e. starting with 'c' is output.

Created: 2008-09-27

Credits: Alan Williams

Pathway to Pubmed (1)

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This workflow takes in a list of KEGG pathway descriptions and searches the PubMed database for corresponding articles. Any matches to the pathways are then retrieved (abstracts only). These abstracts are then returned to the user.

Created: 2008-09-02 | Last updated: 2008-09-08

Credits: Stian Soiland-Reyes Paul Fisher

Attributions: ProteinSynonymsToQuery

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Version 0.0.3 of RSim

Created: 2008-08-24 16:11:28

Credits: Ptimusk

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Plain text

Comments: 0 | Viewed: 26 times | Downloaded: 17 times

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months leap year initialising dataframe for Version ...

Created: 2008-08-24 16:07:13

Credits: Ptimusk

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Excel workbook

Comments: 0 | Viewed: 26 times | Downloaded: 15 times

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days leap year initialising dataframe for Version 0....

Created: 2008-08-24 16:05:58

Credits: Ptimusk

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Excel workbook

Comments: 0 | Viewed: 26 times | Downloaded: 12 times

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hours leap year initialising dataframe for Version 0...

Created: 2008-08-24 16:04:28

Credits: Ptimusk

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Excel workbook

Comments: 0 | Viewed: 61 times | Downloaded: 15 times

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months normal year initialising dataframe for Versio...

Created: 2008-08-24 16:02:18

Credits: Ptimusk

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Excel workbook

Comments: 0 | Viewed: 26 times | Downloaded: 14 times

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days normal year initialising dataframe for Version ...

Created: 2008-08-24 16:01:00

Credits: Ptimusk

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Excel workbook

Comments: 0 | Viewed: 21 times | Downloaded: 15 times

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Hours normal year initialising dataframe for Version...

Created: 2008-08-24 15:56:50

Credits: Ptimusk

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Excel workbook

Comments: 0 | Viewed: 22 times | Downloaded: 18 times

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random workers ages data

Created: 2008-08-02 04:37:14

Credits: Ptimusk

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Plain text

Comments: 0 | Viewed: 27 times | Downloaded: 15 times

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Random workers ages generator

Created: 2008-08-02 04:26:36 | Last updated: 2008-08-02 04:33:08

Credits: Ptimusk

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Rich Text Format document

Comments: 0 | Viewed: 30 times | Downloaded: 18 times

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My FOAF profile (updated)

Created: 2008-07-30 01:45:34 | Last updated: 2013-04-18 17:29:07

Credits: David R Newman

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: RDF data

Comments: 1 | Viewed: 43 times | Downloaded: 15 times

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Taverna 2.1 beta 2 example workflows

Created: 2009-06-26 13:59:43 | Last updated: 2009-12-17 17:08:41

9 items in this pack

Comments: 0 | Viewed: 275 times | Downloaded: 63 times

DataBiNS - Data Mining Workflow for Biolog... (2)

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No description

Created: 2007-12-04 | Last updated: 2007-12-04

Credits: Fong Chun Chan

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Microarray data analysis using R

Created: 2008-07-02 11:30:06 | Last updated: 2010-02-04 11:41:11

3 items in this pack

Comments: 0 | Viewed: 290 times | Downloaded: 88 times

Polling (1)

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No description

Created: 2008-02-19 | Last updated: 2010-11-22

Credits: Stuart Owen

casimir_paper (2)

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No description

Created: 2008-01-22 | Last updated: 2008-05-30

Credits: Damian

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An Introduction to Taverna and myExperiment - Backgr...

Created: 2008-08-04 17:49:10

Credits: Paul Fisher Franck Tanoh Katy Wolstencroft

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: PowerPoint presentation

Comments: 0 | Viewed: 142 times | Downloaded: 191 times

Angiogenesis Feature Extraction workflow (3)

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No description

Created: 2010-03-23 | Last updated: 2012-01-10

Credits: Charalampos

Retrieve TP53 mutations for CABRI cell-lines (3)

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No description

Created: 2010-01-12

Sort & Join - Merge Sort Merge Join (2)

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No description

Created: 2009-04-07

Credits: Daniel de Oliveira

feat_workflow (2)

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No description

Created: 2009-02-03

Credits: Glatard

SannaWorkflow (1)

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Created: 2008-03-07

Credits: Sanna aizad

Link_protein_to_OMIM_disease (1)

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No description

Created: 2007-12-10

Credits: Marco Roos AID

Sort & Join - Quick Sort Nested Loop (1)

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No description

Created: 2009-04-07

Credits: Daniel de Oliveira

Flatten_and_make_unique (1)

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Created: 2007-12-10

Credits: Marco Roos AID

Extract_GetCompoundDetails_with_xpath (1)

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Created: 2007-11-28 | Last updated: 2008-02-19

Credits: Stuart Owen Egon Willighagen

Taverna Tutorial2 (1)

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Created: 2010-02-26 | Last updated: 2010-02-26

Credits: Rodriguez

Attributions: EBI_InterProScan for Taverna 2

t ... (2)

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Created: 2009-08-21 | Last updated: 2009-10-09

Credits: Ctindal

Identify_strain_and_phylogenetic_tree (1)

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No description

Created: 2009-03-20 | Last updated: 2009-03-20

Credits: Aailyso Hamish McWilliam AID

iteration-test (1)

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Created: 2007-12-18

Credits: Stuart Owen

EBI Blast (1)

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Created: 2007-12-12 | Last updated: 2008-01-15

dreseden-term-extraction1 (1)

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Created: 2007-11-22

Credits: Simon Jupp

Find address entry (1)

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No description

Created: 2007-11-05 | Last updated: 2008-09-08

Credits: David Withers

[untitled] (1)

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No description

Created: 2010-03-16

Credits: Paul Fisher

Tree Diagram (1)

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Created: 2009-09-02

Credits: Davej

OJAX++ feed retrieval (1)

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No description

Created: 2009-09-01 | Last updated: 2009-09-01

Credits: Davej

Retrieve UniSTS numerical UID from name of... (2)

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No description

Created: 2009-08-19

Credits: Steffen Möller

Load GO terms in the triplestore (1)

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No description

Created: 2009-05-01

Credits: Francois Belleau

Insert in local triplestore GeneID and KEG... (1)

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No description

Created: 2009-04-28

Credits: Francois Belleau

Get the list of GeneID for all pathways of... (1)

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No description

Created: 2009-04-28

Credits: Francois Belleau

Bio2RDF: CPath search in taxon (1)

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No description

Created: 2009-02-19

Credits: Francois Belleau

Bio2RDF: CPath describe interaction (1)

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No description

Created: 2009-02-19

Credits: Francois Belleau