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Items tagged with "semantic_web" (9)

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Workflows (1)

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Workflow BioAID_EnirchBioModelWithProteinsFromText (v7)

Created: 16/05/09 @ 01:06:26 | Last updated: 16/05/09 @ 01:13:18

Credits: User Marco Roos User Sophia katrenko User Andrew Gibson User M. Scott Marshall User Willem van Hage User Edgar User Martijn Schuemie Network-member AID

License: Creative Commons Attribution-No Derivative Works 3.0 Unported License

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This workflow is for demonstration purposes only. Please contact the authors if you wish to try it. We will gladly collaborate with you. Summary This workflow extracts proteins and protein relations from Medline. Extracted protein names (symbols of at least 3 characters) are validated against mouse, rat, and human UniProt symbols, so the results are limited to these species. This workflow follows the following basic steps: it retrieves documents relevant for the query string i...

Rating: 0.0 / 5 (0 ratings) | Versions: 7 | Reviews: 0 | Comments: 1 | Citations: 0

Viewed: 142 times | Downloaded: 26 times

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Packs (3)

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Pack AIDA toolbox

Created: 01/08/08 @ 11:33:03 | Last updated: 14/02/10 @ 16:04:25

Adaptive Information Disclosure Application toolbox: AIDA web services for automated knowledge extraction and knowledge management Documentation    

9 items in this pack

Comments: 0 | Viewed: 177 times | Downloaded: 21 times

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Pack AIDA demo pack

Created: 14/12/08 @ 21:35:43 | Last updated: 01/05/09 @ 17:35:26

 Pack with AIDA demo material

5 items in this pack

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Pack Supporting material for Roos et al., BMC Bioinformatics, SWAT4LS supplement (2009)

Created: 15/05/09 @ 15:45:32 | Last updated: 11/08/11 @ 10:01:23

Supporting material for BMC Bioinformatics, supplement for Semantic Web Applications and Tools for Life Science (2009) Structuring and extracting knowledge for the support of hypothesis generation in molecular biology Marco Roos, M. Scott Marshall, Andrew P. Gibson, Martijn Schuemie, Edgar Meij, Sophia Katrenko, Willem Robert van Hage, Konstantinos Krommydas, Pieter W. Adriaans Acknowledgements We thank the myGrid team and OMII-UK for their support in applying their e-Science tools, and M...

5 items in this pack

Comments: 0 | Viewed: 39 times | Downloaded: 15 times

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Groups (5)

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Network-member e-science support team for NBIC

Unique name: eScienceSupportTeam4NBIC Created: Sunday 16 March 2008 @ 22:23:11 (GMT)

This group brings together scientists with expertise in both (medical) bioinformatics and e-science. The members can give advice to bioinformaticians who want to adopt an 'e-science approach'. They want to share their expertise and experience for the application of technologies such as workflow, web/biomoby services, grid, semantic web, etcetera. The group was founded in particular for the Du...

3 shared items   |   0 announcements

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Network-member Semantic_BioAID_collaboration

Created: Friday 22 August 2008 @ 10:49:27 (GMT)

Group for collaboration of Andy, Scott, and Marco.

5 shared items   |   1 announcements

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Network-member CWA working group 2.1 - Content Capture

Unique name: CWA_ContentCapture Created: Tuesday 01 September 2009 @ 13:06:04 (GMT)

Concept Web Alliance working group on content capture CWA wants to help disclose experiment-derived knowledge from within the scientific community via concepts and relations between concepts, stored as concept-relation-concept triples that together form a 'nano-publication'. A nano-publication contains a single 'unit of though', and minimal provenance about who made it, where it was stated, ho...

1 shared item   |   1 announcements

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Network-member CWA users

Unique name: CWA_Users Created: Tuesday 01 September 2009 @ 16:35:48 (GMT)

Group for (potential) users of the Concept Web. See below for information on CWA taken from the Concept Web Alliance Blog. Also see other CWA groups here on myExperiment. Please request to join this group if you are (i) a scientist working in application fields such as life science, (ii) interested in computer support for sharing knowledge between (computational) experiments and between scie...

1 shared item   |   0 announcements

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Network-member BioSemantics Privileged Users @ Human Genetics LUMC + collaborators

Unique name: LeidenBioSemanticsUsers Created: Wednesday 23 September 2009 @ 01:10:24 (GMT)

Group of colleagues at the Human Genetics Department of the Leiden University Medical Centre and closely collaborating groups who are interested to be prime users of new developments in BioSemantics and e-Science, and in return are willing to provide feedback and suggestions. See http://biosemantics.org for more information about the BioSemantics collaboration in the Netherlands.

3 shared items   |   1 announcements

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