Workflow Entry: EBI_InterProScan

Created at: 26/10/08 @ 20:33:34      Last updated: 01/04/11 @ 08:52:28
Information Version 2 (of 3)
View version:

Version created on: 31/05/08 @ 11:38:57 by: Hamish McWilliam   |   Revision comment Expand

Last edited on: 25/06/08 @ 06:30:59 by: Hamish McWilliam

Title: EBI_InterProScan

Type: Taverna 1

Information Preview

(Click on the image to get the full size)


Information Description

Perform an InterProScan analysis of a protein sequence using the EBI’s WSInterProScan service (see The input sequence to use and the user e-mail address are inputs, the other parameters for the analysis (see Job_params) are allowed to default.

InterProScan searches a protein sequence against the protein family and domain signature databases integrated into InterPro (see A set of matches to the signatures are returned, which are annotated with the corresponding InterPro and GO term assignments for these signature matches.

Information Download

Information Run

Run this Workflow in the Taverna Workbench...

Option 1:

Copy and paste this link into File > 'Open workflow location...'
[ More InfoExpand ]

Information Workflow Components

Inputs (2)
Processors (10)
Beanshells (2)
Outputs (4)
Links (15)
Coordinations (2)

Information Workflow Type

Taverna 1

Information Original Uploader

Information License

All versions of this Workflow are licensed under:

Information Credits (1)


Information Attributions (0)



Information Tags (10)

Log in to add Tags

Information Shared with Groups (0)


Information Featured In Packs (1)

Log in to add to one of your Packs

Information Ratings (0)


0.0 / 5

(0 ratings)

Log in to rate and see breakdown of ratings

Information Favourited By (0)

No one


Citations (0)


Version History

In chronological order:

Reviews Reviews (0)

No reviews yet

Be the first to review!

Comments Comments (1)

Log in to make a comment

  • Monday 22 September 2008 @ 16:55:20 (UTC)

    Service " Get_XML_result" doesn't seem to run as a result I was unable to load the workfow in Taverna.

Workflow Other workflows that use similar services (17)

Only the first 2 workflows that use similar services are shown. View all workflows that use these services.

Original Uploader

Workflow EBI InterProScan (2)

Created: 03/10/07 @ 18:35:46

License: Creative Commons Attribution-No Derivative Works 3.0 Unported License

EBI InterProScan. Stop fannying around with BLAST and use InterProScan instead.

Rating: 4.0 / 5 (2 ratings) | Versions: 2 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 774 times | Downloaded: 200 times

Tags (4):

Original Uploader

Workflow EBI_InterProScan_with_prompts (1)

Created: 31/05/08 @ 11:40:34 | Last updated: 01/04/11 @ 08:57:45

Credits: User Hamish McWilliam

Attributions: Workflow EBI_InterProScan

License: Creative Commons Attribution 3.0 Unported License

Note: the WSInterProScan web service used by this workflow is no longer available haveing been replaced by the EMBL-EBI's InterProScan (REST) ( and InterProScan (SOAP) ( web services. Thus the workflow described here no longer works, see the alternative workflows for the InterProScan (SOAP) service for workflows which use the new services. Run an InterProScan anal...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 119 times | Downloaded: 77 times

Tags (7):

What is this?

Linked Data

Non-Information Resource URI:

Alternative Formats


Front Page


Invite people to myExperiment

Help pages

About Us

News and Events

Mailing List

Contact Us



Taverna Workflow Workbench




Google Coop Search




Powered by:


Silk icon set 1.3