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Showing 53 results. Use the filters on the left and the search box below to refine the results.
User: Katy Wolstencroft

Blob Galaxy Chip-Seq Gene List

Created: 2012-01-12 12:50:30 | Last updated: 2012-01-12 12:50:31

Credits: User Katy Wolstencroft

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This file contains a list of genes associated with Chip-Seq peaks. It is part of a Galaxy-Taverna Next Gen Sequencing tutorial

File type: Excel workbook

Comments: 0 | Viewed: 42 times | Downloaded: 192 times

This File has no tags!

Blob BioVel Taverna Tutorial

Created: 2011-12-05 11:07:46 | Last updated: 2011-12-05 11:07:49

Credits: User Katy Wolstencroft User Alan Williams User Robert Haines User Biomobst

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This tutorial gives an introduction to Taverna, myExperiment and BioCatalogue, using a case study from ecological niche modelling.

File type: PowerPoint presentation

Comments: 0 | Viewed: 65 times | Downloaded: 163 times

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Workflow FetchandDisplaySpecies (3)

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This workflow uses GBIF to search and report species occurrence data and then displays them on Google Earth. An interactive step then allows you to alter the co-ordinates of data displayed.

Created: 2011-11-27 | Last updated: 2011-11-29

Credits: User Alan Williams

Workflow InterproScan without Looping (1)

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This workflow performs an interproscan at the EBI on sequences provided as input. The output is provided as text or png. This workflow uses the new EBI services, which are asynchronous and require looping over the nested workflow (Status) until the workflow has finished. This workflow will not work properly until we add looping.

Created: 2011-03-16 | Last updated: 2012-08-29

Credits: User Katy Wolstencroft

Workflow EBI_InterproScan_NewServices (2)

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This workflow performs an interproscan on provided sequencesThis workflow performs an interproscan at the EBI on sequences provided as input. The output is provided as text, xml or png. This workflow uses the new EBI services, which are asynchronous and require looping over the nested workflow (Status) until the workflow has finished. Many of the EBI services now work in this way, so you can use this workflow as an example of the invocation pattern and looping configuration.

Created: 2011-01-17 | Last updated: 2011-01-17

Credits: User Katy Wolstencroft User Hamish McWilliam User Stian Soiland-Reyes

Attributions: Workflow EBI_InterProScan for Taverna 2 Workflow EBI_InterProScan for Taverna 2 Workflow EBI_InterProScan

Workflow retry-example (1)

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This workflow executes a local beanshell script that has been programmed to fail on some iterations. It demonstrates the advantages of setting retries in your workflows to make them more robust

Created: 2010-11-08 | Last updated: 2010-11-08

Credits: User Alan Williams

Blob An Introduction to Taverna Tutorial

Created: 2008-06-17 14:17:20

Credits: User Katy Wolstencroft

License: Creative Commons Attribution-Share Alike 3.0 Unported License

No description

File type: PowerPoint presentation

Comments: 0 | Viewed: 114 times | Downloaded: 215 times

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Blob Exploring Taverna 2.1 Beta 1

Created: 2009-06-08 19:29:23 | Last updated: 2009-06-08 19:29:52

Credits: User Katy Wolstencroft

License: Creative Commons Attribution-Share Alike 3.0 Unported License

No description

File type: application/mspowerpoint

Comments: 0 | Viewed: 78 times | Downloaded: 93 times

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Blob Exploring Taverna 2

Created: 2009-05-28 09:08:37

Credits: User Katy Wolstencroft

License: Creative Commons Attribution-Share Alike 3.0 Unported License

No description

File type: PowerPoint presentation

Comments: 0 | Viewed: 45 times | Downloaded: 46 times

This File has no tags!

Blob Introduction to Taverna 1

Created: 2009-05-28 09:07:45

Credits: User Katy Wolstencroft

License: Creative Commons Attribution-Share Alike 3.0 Unported License

No description

File type: PowerPoint presentation

Comments: 0 | Viewed: 54 times | Downloaded: 53 times

This File has no tags!

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