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User: Alan Williams Licence: by-sa

Workflow BiomartAndEMBOSSAnalysis (4)

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Using Biomart and EMBOSS soaplab services, This workflow retrieves a number of sequences from 3 species: mouse, human, rat; align them, and returns a plot of the alignment result. Corresponding sequence ids are also returned.

Created: 2009-09-15 | Last updated: 2015-01-26

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Blob Example XSLT file

Created: 2008-09-26 12:13:31

Credits: User Alan Williams

License: Creative Commons Attribution-Share Alike 3.0 Unported License

XSLT file to be used for example workflows

File type: Binary data

Comments: 0 | Viewed: 140 times | Downloaded: 255 times

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Blob Example XML file

Created: 2008-09-26 12:12:41

Credits: User Alan Williams

License: Creative Commons Attribution-Share Alike 3.0 Unported License

XML file to be used for example workflows

File type: XML

Comments: 0 | Viewed: 181 times | Downloaded: 351 times

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Workflow Secure REST service call example (2)

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This is an example of a workflow that contains a call to a secure REST service that requires user to authenticate with HTTP Basic Authentication. You can use testuser/testpasswd as username and password for authentication when running the workflow.

Created: 2012-04-05 | Last updated: 2014-01-16

Credits: User Alan Williams

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Blob Example SwissProt Data

Created: 2008-09-25 15:09:03

Credits: User Alan Williams

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Example SwissProt data to be used for Taverna examples.

File type: Plain text

Comments: 0 | Viewed: 44 times | Downloaded: 43 times

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Blob Example Genbank data

Created: 2008-09-25 15:00:28

Credits: User Alan Williams

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Example file containing GenBank data so that it can be used for example Taverna workflows

File type: Plain text

Comments: 0 | Viewed: 52 times | Downloaded: 54 times

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Pack IBISBA workflows


Created: 2018-01-28 19:40:56 | Last updated: 2018-01-28 19:43:39

Initial set of IBISBA WP7 workflows

2 items in this pack

Comments: 0 | Viewed: 1 time | Downloaded: 0 times

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Blob Multiple selection

Created: 2015-03-31 11:23:55 | Last updated: 2015-03-31 11:37:25

Credits: User Alan Williams

License: Creative Commons Attribution-Share Alike 3.0 Unported License

An interaction page that allows multiple selections from a list of values.There is a single input port of depth one called selectionValuesThere is a single output port of depth one called answers

File type: htm

Comments: 0 | Viewed: 17 times | Downloaded: 0 times

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Workflow Metabolite pathway search (1)

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The workflow searches for metabolomic pathways that match the entered keywords and returns information about the chosen pathway

Created: 2014-12-18

Credits: User Alan Williams

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Blob XPath service

Created: 2014-10-03 15:36:07

Credits: Network-member myGrid

License: Creative Commons Attribution-Share Alike 3.0 Unported License

A PDF file containing a presentation on how to use the XPath service in Taverna

File type: Adobe PDF

Comments: 0 | Viewed: 3 times | Downloaded: 17 times

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