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Creator:

Jiten Bhagat

Everything You Need To Know About myExperiment...

Created: 02/07/08 @ 22:31:12 | Last updated: 02/07/08 @ 23:11:22

9 items in this pack

Comments: 0 | Viewed: 202 times | Downloaded: 38 times

Creator:

David De Roure

Carole's Keynotes

Created: 27/09/08 @ 19:52:17 | Last updated: 15/10/08 @ 08:55:46

5 items in this pack

Comments: 0 | Viewed: 90 times | Downloaded: 19 times

Administrator:

Carole Goble

myGrid

Unique name: myGrid Created: Friday 30 November 2007 @ 12:19:26 (GMT)

39 shared items   |   0 announcements

Administrator:

Mike Chelen

Taverna Help

Unique name: taverna-help Created: Wednesday 07 January 2009 @ 14:54:33 (GMT)

0 shared items   |   2 announcements

Latest announcement:: Linux users

Administrator:

Paul Fisher

Newcastle MSc.

Unique name: NewcastleMsc Created: Wednesday 04 March 2009 @ 14:53:45 (GMT)

1 shared item   |   0 announcements

Uploader:

Franck Tanoh

Taverna tutorial

Created: 03/03/08 @ 11:15:00 | Last updated: 03/03/08 @ 11:16:11

Credits: Franck Tanoh Katy Wolstencroft

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: PowerPoint presentation

Rating: 4.0 / 5 (1 rating) | Comments: 0 | Viewed: 77 times | Downloaded: 145 times

Uploader:

Katy Wolstencroft

The Data Playground: An Intuitive Workflow Specification Environment

Created: 02/06/08 @ 14:46:40

Credits: Katy Wolstencroft Andrew Gibson

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Adobe PDF

Rating: 4.0 / 5 (1 rating) | Comments: 0 | Viewed: 66 times | Downloaded: 99 times

Uploader:

Katy Wolstencroft

EraSysBio Summer School Taverna Tutorial

Created: 24/07/09 @ 21:54:27

Credits: Katy Wolstencroft

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: application/mspowerpoint

Rating: 0.0 / 5 (0 ratings) | Comments: 0 | Viewed: 12 times | Downloaded: 21 times

Original Uploader

Alan Williams

Example of a conditional execution workflow (v1)

Created: 05/03/08 @ 13:55:45 | Last updated: 25/03/08 @ 14:46:12

Credits: Tomoinn

License: Creative Commons Attribution 3.0 Unported License

If the input is true then the string 'foo' is emited, if false then 'bar'. Just a simple example to show how the monster works, so to speak.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 927 times | Downloaded: 279 times

Original Uploader

Alan Williams

A workflow version of the EMBOSS tutorial (v1)

Created: 05/03/08 @ 14:05:20 | Last updated: 25/03/08 @ 14:43:35

Credits: Tomoinn

License: Creative Commons Attribution 3.0 Unported License

Designed to show the use of EMBOSS based Soaplab services from Taverna, this workflow has no inputs as all initial values are specified as string constants. A sequence set is fetched using the seqret tool, then simultaneously scanned for predicted transmembrane regions and subjected to a multiple alignment using emma. This alignment is then plotted to a set of PNG images and also used to build a profile using the prophecy and prophet tools.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 303 times | Downloaded: 104 times

Original Uploader

Alan Williams

Fetch Dragon images from BioMoby (v3)

Created: 05/03/08 @ 14:09:35 | Last updated: 14/07/10 @ 16:46:37

Credits: Tomoinn

License: Creative Commons Attribution 3.0 Unported License

Fetch images and annotations of snapdragons

Rating: 0.0 / 5 (0 ratings) | Versions: 3 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 230 times | Downloaded: 77 times

Original Uploader

Alan Williams

Retrieve sequence in EMBL format (v3)

Created: 17/06/09 @ 16:51:32

Credits: Franck Tanoh Tomoinn Stuart Owen

License: Creative Commons Attribution 3.0 Unported License

This workflow retrieves a sequence associated with its features in embl format

Rating: 0.0 / 5 (0 ratings) | Versions: 3 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 246 times | Downloaded: 77 times

Original Uploader

Alan Williams

GBSeq test (v2)

Created: 05/03/08 @ 14:15:35 | Last updated: 31/03/08 @ 15:55:09

Credits: Franck Tanoh

License: Creative Commons Attribution 3.0 Unported License

This workflow retrieves nucleotide and protein sequences with the literature and references associated to them given a protein and a nucleotide id.

Rating: 0.0 / 5 (0 ratings) | Versions: 2 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 188 times | Downloaded: 69 times

Original Uploader

Wassinki

Analysing workflows (v3)

Created: 06/05/09 @ 08:49:59 | Last updated: 06/05/09 @ 08:50:29

Credits: Wassinki Pieter Neerincx Katy Wolstencroft Marco Roos

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This workflows analyses workflows stored at the myExperiment site. It is used in the paper submitted to the Workshop on Scientific Workflow 2009. The workflow shows the task usage in the Taverna workflows stored at the myExperiment site The amount of services used The amount of local processors used The amount of scripting tasks The amount of sub workflows Furthermore it classifies the local services based on their intended function. The workflow has two inputs: ...

Rating: 0.0 / 5 (0 ratings) | Versions: 3 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 118 times | Downloaded: 38 times

Original Uploader

Stian Soiland-Reyes

Find/show Taverna's home directory (v1)

Created: 12/04/10 @ 15:11:47 | Last updated: 12/04/10 @ 15:17:57

Credits: Stian Soiland-Reyes

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Find Taverna's home directory and open that folder using Explorer/Finder/Gnome. This is the folder that is typically something like C:\Users\stain\AppData\Roaming\taverna-2.1.2, C:\Documents and settings\stain\taverna-2.1.2, /home/stain/.taverna-2.1.2 or /Users/stain/Library/Application support/taverna-2.1.2 This workflow should work on both Taverna 1 and Taverna 2. For Taverna 2 the beanshell script uses reflection to try to call ApplicationRuntime.getInstance().getApplicationHome() ...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 8 times | Downloaded: 3 times